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04302015_12_Rhodobacterales_64_8

In projects: 04302015_12

Consensus taxonomy: Rhodobacterales  →  Alphaproteobacteria  →  Proteobacteria  →  Bacteria

Description

unconfined on TS-ESOM

Displaying items 1-50 of 151 in total
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contig # features sequence size GC content (%) Cov Coding Density (%) notes
04302015_12_scaffold_19321
Order: Rhodobacterales (66.67%)
3 1322 bp 62.41 7.65 71.94
04302015_12_scaffold_8349
Species: Hirschia baltica (50%)
2 2503 bp 62.45 8.08 66.88
04302015_12_scaffold_26798
Species: Oceanicola batsensis (100%)
1 1010 bp 62.48 7.62 62.97
04302015_12_scaffold_16841
Order: Rhodobacterales (66.67%)
3 1485 bp 62.49 8.24 75.76
04302015_12_scaffold_5468
Genus: Rhodobacter (60%)
5 3806 bp 62.51 6.63 83.16
04302015_12_scaffold_41565
Species: Loktanella cinnabarina (50%)
2 1238 bp 62.52 9.64 70.27
04302015_12_scaffold_4912
Species: Hyphomonas oceanitis (75%)
4 3567 bp 62.57 7.03 96.30
04302015_12_scaffold_12031
Order: Rhodobacterales (50%)
4 1930 bp 62.59 10.17 77.88
04302015_12_scaffold_20126
Species: Hirschia baltica (100%)
1 1279 bp 62.63 7.56 99.69
04302015_12_scaffold_19554
Species: Hyphomonas neptunium (100%)
1 1309 bp 62.64 8.65 83.19
04302015_12_scaffold_11647
Species: Hirschia baltica (50%)
2 1976 bp 62.65 7.49 90.49
04302015_12_scaffold_2352
Species: Hirschia baltica (75%)
4 5729 bp 62.66 8.46 88.71
04302015_12_scaffold_12963
Species: Hirschia baltica (100%)
2 1825 bp 62.79 6.54 90.90
04302015_12_scaffold_9938
Species: Hyphomonas hirschiana (50%)
2 2219 bp 62.87 7.35 99.64
04302015_12_scaffold_8809
Species: Hirschia baltica (66.67%)
3 2412 bp 62.89 7.70 95.52
04302015_12_scaffold_863
Order: Rhodobacterales (75%)
24 18602 bp 62.90 8.45 94.39
04302015_12_scaffold_14445
Species: Hyphomonas neptunium (50%)
2 1674 bp 63.02 8.84 91.04
04302015_12_scaffold_5335
Species: RHI_Rhodobacterales_62_75 (54.55%)
11 5883 bp 63.03 8.50 78.79
04302015_12_scaffold_5682
Genus: Haematobacter (50%)
4 3249 bp 63.03 8.78 92.61
04302015_12_scaffold_9272
Order: Rhodobacterales (66.67%)
3 2332 bp 63.04 9.58 82.08
04302015_12_scaffold_4500
Species: Roseivivax atlanticus (75%)
4 3748 bp 63.05 6.65 96.37
04302015_12_scaffold_2308
Species: RHI_Rhodobacterales_62_75 (50%)
8 6915 bp 63.09 7.77 84.51
04302015_12_scaffold_11302
Order: Rhodobacterales (80%)
5 2729 bp 63.10 10.24 82.45
04302015_12_scaffold_1481
Order: Rhodobacterales (75%)
12 11857 bp 63.10 8.21 95.26
04302015_12_scaffold_15110
Species: Hyphomonas sp. CY54-11-8 (50%)
2 1617 bp 63.20 6.82 80.52
04302015_12_scaffold_14426
Species: Hirschia baltica (60%)
5 1677 bp 63.21 8.10 98.21
04302015_12_scaffold_2116
Species: Hirschia baltica (75%)
4 8228 bp 63.31 11.32 96.62
04302015_12_scaffold_2176
Order: Rhodobacterales (80%)
5 6004 bp 63.41 6.79 97.39
04302015_12_scaffold_24989
Species: Rhodobacter sp. AKP1 (100%)
1 1072 bp 63.43 8.87 80.04
04302015_12_scaffold_15651
Species: CG_Rhodob_01 (50%)
2 1574 bp 63.47 8.73 86.34
04302015_12_scaffold_7627
Order: Rhodobacterales (50%)
6 4149 bp 63.51 7.90 59.65
04302015_12_scaffold_23125
Species: Rhodobacter sp. CACIA14H1 (50%)
2 1143 bp 63.52 6.87 91.86
04302015_12_scaffold_506
Class: Alphaproteobacteria (81.25%)
16 18910 bp 63.55 8.45 82.38
04302015_12_scaffold_461
Order: Rhodobacterales (91.3%)
23 16649 bp 63.56 7.90 89.95
04302015_12_scaffold_25603
Species: Rhodobacter sp. CACIA14H1 (50%)
2 1051 bp 63.56 7.47 91.91
04302015_12_scaffold_571
Order: Rhodobacterales (55%)
40 44118 bp 63.57 7.54 84.37
04302015_12_scaffold_8512
Species: Paracoccus versutus (50%)
2 2470 bp 63.60 6.72 60.97
04302015_12_scaffold_23466
Genus: Hyphomonas (100%)
3 1129 bp 63.60 7.22 90.35
04302015_12_scaffold_7000
Species: Hyphomonas neptunium (50%)
2 2818 bp 63.63 7.45 81.76
04302015_12_scaffold_14714
Species: Bosea sp. LC85 (100%)
2 1651 bp 63.66 8.69 93.40
04302015_12_scaffold_1115
Order: Rhodobacterales (83.33%)
12 10128 bp 63.67 8.36 97.48
04302015_12_scaffold_8461
Species: BJP_IG2158_Rhodobacterales_69_12 (50%)
4 2480 bp 63.71 7.31 98.83
04302015_12_scaffold_1176
Order: Rhodobacterales (80%)
5 9022 bp 63.71 8.00 93.60
04302015_12_scaffold_17389
Species: BJP_IG2158_Rhodobacterales_69_12 (100%)
1 1447 bp 63.72 7.10 99.93
04302015_12_scaffold_6475
Species: Hirschia baltica (100%)
5 2968 bp 63.78 8.04 75.20
04302015_12_scaffold_1196
Class: Alphaproteobacteria (54.55%)
11 8900 bp 63.78 7.99 80.60
04302015_12_scaffold_327
Order: Rhodobacterales (63.01%)
73 73421 bp 63.84 7.83 94.23
04302015_12_scaffold_16292
Genus: Hyphomonas (50%)
4 2865 bp 63.87 6.85 87.02
04302015_12_scaffold_584
Order: Rhodobacterales (50%)
12 14677 bp 63.91 8.51 92.19
04302015_12_scaffold_17708
Species: Wenxinia marina (66.67%)
3 1425 bp 63.93 9.01 74.74
Displaying items 1-50 of 151 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.