ggKbase | organisms

04302015_13_Xanthomonadales_68_4

In projects: 04302015_13

Consensus taxonomy: Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Metagenomic Context

Parent: 04302015_13_UNK

Properties

Avg. coverage: 4.10 Longest contig: 5.06 Kbp Bin length: 1.16 Mbp GC content: 68.22 %

Contigs count: 746 Features count: 1660 rRNAs count: 0 tRNAs count: 10

Genome completeness

partial RP 19 / 55 BSCG 20 / 51 ASCG 4 / 38

Displaying items 501-550 of 746 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
04302015_13_scaffold_2863 Species: Rhodanobacter thiooxydans (50%)	2	1143 bp	68.50	1.85	95.01
04302015_13_scaffold_3283 Species: Acidovorax sp. JS42 (50%)	2	1013 bp	61.80	4.47	92.10
04302015_13_scaffold_1888 Species: Oleiagrimonas soli (50%)	2	1656 bp	67.81	3.01	95.47
04302015_13_scaffold_3284 Species: Rhodanobacter fulvus (100%)	2	1013 bp	69.60	3.43	103.65
04302015_13_scaffold_3030 Species: Dyella jiangningensis (100%)	2	1085 bp	68.94	3.76	101.20
04302015_13_scaffold_3286 Species: RIFOXYA1_FULL_Rhodanobacter_67_6_curated (50%)	2	1011 bp	69.54	4.03	97.92
04302015_13_scaffold_2099 Species: Rhodanobacter thiooxydans (50%)	2	1510 bp	66.75	2.70	92.58
04302015_13_scaffold_3287 Species: Dyella japonica (50%)	2	1011 bp	72.40	3.58	90.50
04302015_13_scaffold_2356 Species: Rhodanobacter fulvus (50%)	2	1342 bp	67.21	3.94	95.01
04302015_13_scaffold_2612 Species: Dyella japonica (50%)	2	1232 bp	69.89	3.55	94.72
04302015_13_scaffold_2868 Species: Dyella jiangningensis (50%)	2	1141 bp	71.25	4.76	100.18
04302015_13_scaffold_1892 Species: Rhodanobacter sp. 115 (50%)	2	1655 bp	72.02	3.56	100.06
04302015_13_scaffold_2101 Species: Lysobacter capsici (50%)	2	1508 bp	71.75	4.41	79.58
04302015_13_scaffold_2613 Species: Rhodanobacter thiooxydans (50%)	2	1232 bp	72.65	3.06	100.08
04302015_13_scaffold_1637 Species: Rhodanobacter thiooxydans (50%)	2	1924 bp	70.06	3.14	76.40
04302015_13_scaffold_3033 Species: Xanthomonas sacchari (50%)	2	1084 bp	69.83	2.51	95.20
04302015_13_scaffold_3289 Species: Rhodanobacter fulvus (50%)	2	1010 bp	69.31	3.89	75.74
04302015_13_scaffold_2358 Species: Lysobacter dokdonensis (50%)	2	1342 bp	67.36	3.71	61.70
04302015_13_scaffold_3290 Species: Rhodanobacter sp. 115 (50%)	2	1010 bp	70.40	3.14	77.52
04302015_13_scaffold_2615 Species: Dyella japonica (50%)	2	1230 bp	67.24	2.58	92.20
04302015_13_scaffold_3035 Species: Rhodanobacter thiooxydans (50%)	2	1082 bp	72.18	2.93	56.56
04302015_13_scaffold_2360 Species: Rhodanobacter denitrificans (100%)	2	1341 bp	70.62	2.36	93.29
04302015_13_scaffold_1640 Species: Dyella japonica (50%)	2	1916 bp	67.33	2.84	96.61
04302015_13_scaffold_2873 Species: RIFOXYA1_FULL_Rhodanobacter_67_6_curated (50%)	2	1138 bp	69.68	3.05	100.18
04302015_13_scaffold_3037 Species: Rhodanobacter spathiphylli (50%)	2	1081 bp	66.98	3.91	93.25
04302015_13_scaffold_2106 Species: Rhodanobacter sp. 115 (100%)	2	1504 bp	66.36	3.31	99.34
04302015_13_scaffold_2618 Species: Dyella japonica (100%)	2	1230 bp	67.56	3.56	93.17
04302015_13_scaffold_2874 Species: Rhodanobacter fulvus (50%)	2	1138 bp	67.40	3.18	83.57
04302015_13_scaffold_2363 Species: Rhodanobacter denitrificans (50%)	2	1340 bp	67.84	3.49	92.69
04302015_13_scaffold_2619 Species: Rhodanobacter denitrificans (50%)	2	1229 bp	69.57	3.69	91.29
04302015_13_scaffold_3039 Species: Rhodanobacter denitrificans (50%)	2	1080 bp	64.63	6.71	103.61
04302015_13_scaffold_3295 Species: Rhodanobacter thiooxydans (50%)	2	1007 bp	71.90	1.95	92.65
04302015_13_scaffold_2109 Species: Rhodanobacter sp. 115 (50%)	2	1501 bp	65.76	2.72	85.54
04302015_13_scaffold_1645 Species: Rhodanobacter thiooxydans (100%)	2	1911 bp	67.66	3.32	100.16
04302015_13_scaffold_3041 Species: Rhodanobacter sp. 115 (100%)	2	1080 bp	65.93	3.64	94.44
04302015_13_scaffold_3297 Species: Dyella japonica (50%)	2	1007 bp	68.82	2.70	91.46
04302015_13_scaffold_2878 Species: Rhodanobacter denitrificans (50%)	2	1136 bp	68.40	3.46	93.22
04302015_13_scaffold_3042 Species: Rhodanobacter denitrificans (100%)	2	1079 bp	65.52	3.92	99.26
04302015_13_scaffold_1904 Species: Dyella jiangningensis (50%)	2	1645 bp	69.60	5.23	98.30
04302015_13_scaffold_2116 Species: Pseudoxanthomonas spadix (100%)	2	1498 bp	72.56	3.93	100.13
04302015_13_scaffold_2628 Species: RIFOXYA1_FULL_Rhodanobacter_67_6_curated (50%)	2	1227 bp	67.07	3.32	91.93
04302015_13_scaffold_3048 Species: Dyella jiangningensis (50%)	2	1078 bp	73.38	2.80	90.17
04302015_13_scaffold_3304 Species: RIFOXYA1_FULL_Rhodanobacter_67_6_curated (50%)	2	1005 bp	67.36	3.46	90.45
04302015_13_scaffold_3305 Species: Arenimonas oryziterrae (50%)	2	1005 bp	74.13	3.31	100.30
04302015_13_scaffold_2118 Species: Rhodanobacter spathiphylli (50%)	2	1496 bp	74.20	3.43	91.04
04302015_13_scaffold_2374 Species: Dyella jiangningensis (50%)	2	1333 bp	70.59	2.95	99.02
04302015_13_scaffold_3051 Species: Dyella jiangningensis (50%)	2	1077 bp	72.42	2.80	98.89
04302015_13_scaffold_2888 Species: Rhodanobacter sp. 115 (50%)	2	1131 bp	72.33	2.54	95.76
04302015_13_scaffold_3308 Species: Rhodanobacter denitrificans (50%)	2	1004 bp	70.22	2.86	100.10
04302015_13_scaffold_2121 Species: Rhodanobacter thiooxydans (50%)	2	1496 bp	70.32	3.33	95.45

Displaying items 501-550 of 746 in total

04302015_13_Xanthomonadales_68_4

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

04302015_13_Xanthomonadales_68_4

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

Merge with other organism

Processing

Terms of Service

Search Help