ggKbase home page

04302015_16_scaffold_897_3

Organism: 04302015_16_Hydrogenophilales_61_112

near complete RP 48 / 55 MC: 2 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 2
Location: 451..1761

Top 3 Functional Annotations

Value Algorithm Source
Type I secretion outer membrane protein, TolC id=1304148 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb similarity UNIREF
DB: UNIREF100
  • Identity: 80.7
  • Coverage: 435.0
  • Bit_score: 683
  • Evalue 1.10e-193
type I secretion outer membrane protein TolC; K12340 outer membrane channel protein similarity KEGG
DB: KEGG
  • Identity: 75.2
  • Coverage: 435.0
  • Bit_score: 631
  • Evalue 2.00e-178
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 84.4
  • Coverage: 437.0
  • Bit_score: 706
  • Evalue 2.20e-200

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD1_FULL_Hydrogenophilales_62_11_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1311
ATGCCTTTCAAGCTGTTGACGCTTGCCCTCGCGACGCTCCTCGCGCCCGCCGTTCAGGCGACCAACCTCACCGACGTCTACCGCGACGCGCAGACCTACGATGCGCAATACGCGGCTGCGCGCGCCGCGTCGCAGGCCGGGCAGGAAAAGTCTGCCCAGGGTCGCGCCGGCCTGTTGCCGCAGGTCAACCTCAACGGCAACGTGCGCTACAACGATGTCACCTCCACCTTGCCCGGCGGCGACGCGCGCTACGACTCCAACGGCCTCGGCATCAACGCCTCGCAGCCGCTGTATCGCAAGCAGAATTTCGTGCAATACGAACAGGCCAAAAACCAGACCAAAATCGCCGACATGCAATTCCGGCTGGCCGAGCAGGACCTGATCCTGCGTGTCGCGCGGGCCTATTTCGATGTGCTGGAATCGCAGGACAACATTGCCTTCATCAACGCGCAAAAGTCCGCCATCACTGAGCAGCTGGCTGCGGCCAAGCGCAACTTCGAAGTCGGCACCGCCACCATCACCGACACCCACGAAGCGCAGGCGCGCTTCGACCTTGCTGTGGCGCAGGAAATTGCCGAGCAGAACAACCTCAACATCCGTCTGCGTTCGCTGGAAAGGCTTGTTGGCAAACCGCCCGGATCGCTCGATGCGCTGGTCGACAACAAGCTGCTGCAAGCCGAATCCATCGGCATCGATGACTGGGCCGAACGCGCCAGCAAAGGCAACCTGCAAGCCGAAATCCAGCGGCTTTCCAAGGCCATCGCCGATCAGGAAATCGAGCGCACCCGCGCCGGCCACTACCCCACGCTCGACGCTGTCGCTGGCTACACCATCAACAACGGGCAGAATTTCGGCTCACTGCAGGTGGACACCCGTACTGCCAGCGTCGGCGTCGAACTCAACCTGCCGATCTATCAGGGTGGACTGACAAGCTCGCGCGTACGCGAAGCCGTCGCCAACCAGGAAAAAGCACGCCACGATCTGGAGTCCGCCACCCGCGACGCCAGCCTGCAAGCGCGCCAGGCCTGGCTTAACGTCAATAGCGGCGTGGCCCGCGTGCGGGCGCTGGAGCAGGCGCTGGTCTCGACCCAGGCGCAGCTCGATTCGACCAAGCTCGGCCTGGAGGTCGGCGTGCGGACCAGCCTCGACGTGCTGAACGCCGAACAGCAGGTCCTCTCGGCCCGCCGTGATCTGTCTGCCGCGCGCTATGCCTACCTGTTGTCGGGCCTGTCGCTCAAGGCCGCCGACGGCAGCCTCGGCCCCGCCGACCTGGCCGCCATTGACCAGCATCTGAAACCCGTAGCGAATTAA
PROTEIN sequence
Length: 437
MPFKLLTLALATLLAPAVQATNLTDVYRDAQTYDAQYAAARAASQAGQEKSAQGRAGLLPQVNLNGNVRYNDVTSTLPGGDARYDSNGLGINASQPLYRKQNFVQYEQAKNQTKIADMQFRLAEQDLILRVARAYFDVLESQDNIAFINAQKSAITEQLAAAKRNFEVGTATITDTHEAQARFDLAVAQEIAEQNNLNIRLRSLERLVGKPPGSLDALVDNKLLQAESIGIDDWAERASKGNLQAEIQRLSKAIADQEIERTRAGHYPTLDAVAGYTINNGQNFGSLQVDTRTASVGVELNLPIYQGGLTSSRVREAVANQEKARHDLESATRDASLQARQAWLNVNSGVARVRALEQALVSTQAQLDSTKLGLEVGVRTSLDVLNAEQQVLSARRDLSAARYAYLLSGLSLKAADGSLGPADLAAIDQHLKPVAN*