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04302015_16_scaffold_2762_6

Organism: 04302015_16_Novosphingobium_62_11

partial RP 24 / 55 MC: 5 BSCG 27 / 51 MC: 8 ASCG 7 / 38 MC: 4
Location: 2627..3091

Top 3 Functional Annotations

Value Algorithm Source
rimO; ribosomal protein S12 methylthiotransferase; K14441 ribosomal protein S12 methylthiotransferase [EC:2.-.-.-] similarity KEGG
DB: KEGG
  • Identity: 96.1
  • Coverage: 155.0
  • Bit_score: 299
  • Evalue 8.40e-79
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000255|HAMAP-Rule:MF_01865}; Short=S12 MTTase {ECO:0000255|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000255|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000255|HAMAP-Rule:MF_01865};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000255|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000255|HAMAP-Rule:MF_01865}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomon similarity UNIPROT
DB: UniProtKB
  • Identity: 96.1
  • Coverage: 155.0
  • Bit_score: 299
  • Evalue 3.80e-78
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=RIMO_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 96.1
  • Coverage: 155.0
  • Bit_score: 299
  • Evalue 2.70e-78

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Taxonomy

Novosphingobium aromaticivorans → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 465
ATGGCAAGCCAGATTCCCCCCATCGTCCTTCCCGAAGCCCCCAAAGTCGGCATGGTCAGCCTTGGCTGCCCCAAAGCGCTGGTCGATTCCGAACGGATTCTTACGCGCCTGCGCGCCGATGGCTATGCGATGAGCGCCGACTATGCCGGCGCCGATGTCGTGCTGGTCAACACCTGCGGCTTCCTTGATTCCGCCAAGGAGGAAAGCCTTGCCGCGATTGGTGAGGCGATTGCCGAAAACGGCCGGGTGATCGTGACCGGGTGCATGGGCAACGAGGCCGAAGCGATCCGTGCCAAGTTCCCGCAGGTTCTGGCCGTTACCGGCGCACACCAGTACGAAGCCGTGGTGGAGGCCGTGCACGAAGCTGCCCCGCCCAGCATGGGCCCATATATCGACCTGATCCCGCAGGCCGAACCCGGTGATGTAAAGCTCACCCCGCGTCACTACGCCTATCTGAAAATTTCG
PROTEIN sequence
Length: 155
MASQIPPIVLPEAPKVGMVSLGCPKALVDSERILTRLRADGYAMSADYAGADVVLVNTCGFLDSAKEESLAAIGEAIAENGRVIVTGCMGNEAEAIRAKFPQVLAVTGAHQYEAVVEAVHEAAPPSMGPYIDLIPQAEPGDVKLTPRHYAYLKIS