ggKbase home page

04302015_21_scaffold_2086_3

Organism: 04302015_21_Verrucomicrobia_51_4

partial RP 27 / 55 BSCG 28 / 51 MC: 2 ASCG 11 / 38
Location: comp(541..1188)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter; K06861 lipopolysaccharide export system ATP-binding protein [EC:3.6.3.-] similarity KEGG
DB: KEGG
  • Identity: 66.0
  • Coverage: 209.0
  • Bit_score: 277
  • Evalue 2.80e-72
ABC-type (Unclassified) transport system, ATPase component n=1 Tax=uncultured verrucomicrobium HF0500_27H16 RepID=E7C5K3_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 66.2
  • Coverage: 204.0
  • Bit_score: 262
  • Evalue 3.00e-67
ABC transporter related protein {ECO:0000313|EMBL:ADE56148.1}; TaxID=583355 species="Bacteria; Verrucomicrobia; Opitutae; Puniceicoccales; Puniceicoccaceae; Coraliomargarita.;" source="Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193; / KCTC 12865).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.0
  • Coverage: 209.0
  • Bit_score: 277
  • Evalue 1.20e-71

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Coraliomargarita akajimensis → Coraliomargarita → Puniceicoccales → Opitutae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 648
ATGTTTATGACCGAAGCCTCCTCCAAAGCCGAAACCTTTACAGGCATCCGCACACAGCATCTGACGAAACGCTACGGCAAGCGCACAGTCGTCAACGGTGTAGATATCGAAGTGCATCCGGGTGAAATTGTGGGTCTGTTAGGGCCCAATGGCGCTGGCAAAACGACGACCTTCTACATGATTGTAGGTTTGGTTCCTGCCAGTGATGGCCAGGTCATTTACGACAACAAAGATGTCACTGCGTTGCCGATGTTCAAGCGAGCTCAAGGCGGGATTGGTTATCTCCCCCAAGAAGCTTCGGTGTTTCGCAAATTATCAGTCGAGGATAACATCCGCGCAATTGTCGAGACGCTCCCTATTGCACGCTCCGAGCGCGATGCTCGAGTGGCCGAGCACCTGGCCGAGTTGCATCTGACGCATTTAGCCAAGCAAAAAGCATTTACTCTTAGCGGTGGCGAGCGCCGTCGTTTAGAGATTACCCGCGCATTAGTCACGAAGCCACGTTTCATTTTGATGGACGAACCCTTCAGCGGCGTGGACCCGATTAGCGTAAGCGATGTGCAATCGATCATCGTTAGCCTAAAAGCTCGCGGGATCGGTATTTTGATTATGCACAGGATGAGAGCCTTAATCTGGCTGACCTCATAG
PROTEIN sequence
Length: 216
MFMTEASSKAETFTGIRTQHLTKRYGKRTVVNGVDIEVHPGEIVGLLGPNGAGKTTTFYMIVGLVPASDGQVIYDNKDVTALPMFKRAQGGIGYLPQEASVFRKLSVEDNIRAIVETLPIARSERDARVAEHLAELHLTHLAKQKAFTLSGGERRRLEITRALVTKPRFILMDEPFSGVDPISVSDVQSIIVSLKARGIGILIMHRMRALIWLTS*