ggKbase home page

04302015_21_scaffold_4094_2

Organism: 04302015_21_Deltaproteobacteria_66_5

partial RP 28 / 55 MC: 2 BSCG 31 / 51 MC: 3 ASCG 10 / 38 MC: 4
Location: comp(442..1452)

Top 3 Functional Annotations

Value Algorithm Source
RluA family pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] similarity KEGG
DB: KEGG
  • Identity: 50.6
  • Coverage: 324.0
  • Bit_score: 295
  • Evalue 1.50e-77
Pseudouridine synthase id=4963289 bin=GWA2_Deltaproteo_65_63 species=Asticcacaulis excentricus genus=Asticcacaulis taxon_order=Caulobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 84.9
  • Coverage: 338.0
  • Bit_score: 575
  • Evalue 4.20e-161
  • rbh
Tax=CG_Delta_02 similarity UNIPROT
DB: UniProtKB
  • Identity: 88.6
  • Coverage: 324.0
  • Bit_score: 576
  • Evalue 2.60e-161

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CG_Delta_02 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1011
ATGTCCTGCTCAAGCCGGCCGGCCACATCCCCTCGAAGATCTGGTAGCGTGCCGGACGTGCCGTGCGGGACGCACCGGCTGACCGTTCCGGCCGACCGGGCGGGGGAACGCATCGACCGGTACCTGTCGGAGGCGATCCCGGGGATCTCCCGGGCGCGCGGGCAGCGGTTGATCGAGGAGGGGAACGTCCGGCTGGCGGGAGAGACCGTGCGTCCGTCGACCCGCCTGAAGGGCGGGGAACCGGTGACCGTCGTAGTTCCTCCGCCCGTCCCCCTCGACATGATGCCGGAGGATCTTCCCCTCCTTGTGCTGTATGAAGACGCGGATCTGCTGGTCGTCGAAAAACCCGCCGGCATGGTGGTTCACCCCGCGCCGGGGCACTCCCGCGGAACCCTCGTGAACGCGCTCCTCGGGCGCTCCGACACCCTGTCCGGGATCGGGGGCGTTTCCCGCCCGGGGATCGTCCACCGGCTCGATCGTGACACCTCCGGGGTTCTCGTGGTCGCGAGGACCGACGCCGCCCACAGGACGCTGTCCGCCCGTTTCGCCATCCACGCGATGGACCGGAGATACCATGGGATCGTCTTCGGAGGCCCGCCTGCGGACACGGGGACCGTGTCGACGCGGATCGGGAGGCACCCCGTCCACCGGAAAAAGATGGCGGTGCTGCCGGCGGGGGGACGGGAGGCCGTCACCCGCTACCGGCGGCTCGAAACGTTCGGCCCCTTCTCCCTTCTCGAGTTCCTCCTTTCGACGGGACGCACACACCAGGTGCGGGTGCACTGCGCCCACCTCGGCTGCCCGATCGTCGGGGACGACGTGTACGGAAGGTCGCGGAAGATCCCCCTCGGGAAGGGGACGTCCGCGCGGACGGTGACCGTCTCCCGTTTTCTCCTGCACGCGTTCCACCTCGCGTTTCCGCATCCGGTCACCGGGGAGCCCCTCTCCTTCACCATCCCCGATCCGCCGGAGTTCGCTGATTTTCGGGATGCGGTGGAAAACGTGCCTTGA
PROTEIN sequence
Length: 337
MSCSSRPATSPRRSGSVPDVPCGTHRLTVPADRAGERIDRYLSEAIPGISRARGQRLIEEGNVRLAGETVRPSTRLKGGEPVTVVVPPPVPLDMMPEDLPLLVLYEDADLLVVEKPAGMVVHPAPGHSRGTLVNALLGRSDTLSGIGGVSRPGIVHRLDRDTSGVLVVARTDAAHRTLSARFAIHAMDRRYHGIVFGGPPADTGTVSTRIGRHPVHRKKMAVLPAGGREAVTRYRRLETFGPFSLLEFLLSTGRTHQVRVHCAHLGCPIVGDDVYGRSRKIPLGKGTSARTVTVSRFLLHAFHLAFPHPVTGEPLSFTIPDPPEFADFRDAVENVP*