ggKbase home page

04302015_21_scaffold_28320_1

Organism: 04302015_21_Deltaproteobacteria_66_5

partial RP 28 / 55 MC: 2 BSCG 31 / 51 MC: 3 ASCG 10 / 38 MC: 4
Location: comp(1..492)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase b; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] similarity KEGG
DB: KEGG
  • Identity: 57.9
  • Coverage: 164.0
  • Bit_score: 169
  • Evalue 1.10e-39
tRNA pseudouridine synthase B id=1817144 bin=GWB2_Deltaproteobacteria_65_81 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 89.0
  • Coverage: 164.0
  • Bit_score: 288
  • Evalue 5.00e-75
Tax=RIFOXYD2_FULL_Deltaproteobacteria_66_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 93.3
  • Coverage: 164.0
  • Bit_score: 299
  • Evalue 2.30e-78

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD2_FULL_Deltaproteobacteria_66_9_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 492
GTGACGGCGGGGGTCCTGGTCGTCGACAAGCCACGGGGGATCACCTCCTTCGACGCGGTCCAGGCCGTGGGCCGGATCCTCAAGGAGCGGAAGTGCGGCCACGCCGGCACCCTCGACCCGATGGCCACCGGCGTCCTGCCGGTGTGCGTCGGAGCCGCAACGAAGATCGCGGGCTATCTCACGGAAGAAGAGAAGGAGTACGAGGCGACGTTCGCGTTCGGCGTCGCGACGGACACCGGCGACGCCACGGGGAAGCCCGTGGAGGAGCGTACCGGGGCCACGGCCCCGGAAGGCGCCGTGGCGGAGGCGCTGGCGGCCATGGTGGGCACCTTCGAACAGGTCCCCCCGGCGTACTCCGCGGTCAAGGTGGGCGGGGTGCGCTCCTATACGCTTGCGCGGAAGGGGATGGAAGTTCCTCTCGCGGCGCGCCGGGTCACGGTCCGCGAGGCGCGGCTCCTCTCCATCGGGCCGGACCGGTTTCGGGTGTTCCTC
PROTEIN sequence
Length: 164
VTAGVLVVDKPRGITSFDAVQAVGRILKERKCGHAGTLDPMATGVLPVCVGAATKIAGYLTEEEKEYEATFAFGVATDTGDATGKPVEERTGATAPEGAVAEALAAMVGTFEQVPPAYSAVKVGGVRSYTLARKGMEVPLAARRVTVREARLLSIGPDRFRVFL