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04302015_21_Deltaproteobacteria_66_5

In projects: 04302015_21

Consensus taxonomy: Deltaproteobacteria  →  Proteobacteria  →  Bacteria

Metagenomic Context

Parent: 04302015_21_UNK

Properties

Avg. coverage: 4.97 Longest contig: 6.25 Kbp Bin length: 1.86 Mbp GC content: 66.49 %
Contigs count: 1138 Features count: 2417 rRNAs count: 0 tRNAs count: 5

Genome completeness

partial RP 28 / 55 MC: 2 BSCG 31 / 51 MC: 3 ASCG 10 / 38 MC: 4
Displaying items 701-750 of 1138 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
04302015_21_scaffold_27656
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (50%)
2 1203 bp 69.74 4.99 99.50
04302015_21_scaffold_28585
Species: CG_Delta_02 (100%)
2 1182 bp 71.32 5.58 99.24
04302015_21_scaffold_31553
Species: Anaeromyxobacter sp. PSR-1 (50%)
2 1119 bp 72.12 4.16 102.41
04302015_21_scaffold_19953
Species: CG_Delta_02 (100%)
2 1435 bp 67.94 3.97 100.14
04302015_21_scaffold_34609
Species: CG_Delta_02 (100%)
2 1063 bp 69.33 4.66 100.19
04302015_21_scaffold_17362
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (50%)
2 1547 bp 66.58 4.56 96.19
04302015_21_scaffold_15250
Species: RIFOXYD2_FULL_Deltaproteobacteria_66_9_curated (50%)
2 1655 bp 70.57 4.53 100.06
04302015_21_scaffold_15506
Species: Desulfovibrio sp. 6_1_46AFAA (50%)
2 1641 bp 58.99 4.30 99.82
04302015_21_scaffold_31298
Species: Geobacter daltonii (50%)
2 1124 bp 60.59 4.00 94.22
04302015_21_scaffold_30691
Species: CG_Delta_02 (50%)
2 1136 bp 61.27 4.49 78.43
04302015_21_scaffold_15251
Species: RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated (50%)
2 1655 bp 69.97 3.99 98.97
04302015_21_scaffold_33115
Species: GWC2_Deltaproteobacteria_65_14_curated (50%)
2 1089 bp 68.14 3.03 100.00
04302015_21_scaffold_28076
Species: Chondromyces apiculatus (50%)
2 1193 bp 59.26 4.15 90.03
04302015_21_scaffold_11676
Species: GWA2_Deltaproteobacteria_65_63_curated (50%)
2 1893 bp 70.10 5.55 100.00
04302015_21_scaffold_17621
Species: CG_Delta_02 (50%)
2 1535 bp 64.56 4.30 89.12
04302015_21_scaffold_35142
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (50%)
2 1053 bp 60.97 4.56 94.02
04302015_21_scaffold_24214
Species: CG_Delta_02 (50%)
2 1292 bp 70.20 6.04 100.08
04302015_21_scaffold_8831
Species: Desulfovibrio sp. X2 (50%)
2 2173 bp 66.96 3.73 100.09
04302015_21_scaffold_6327
Species: Geobacter daltonii (50%)
2 4278 bp 59.51 5.96 86.19
04302015_21_scaffold_22055
Species: BJP_IG2069_Syntrophobacterales_46_30 (50%)
2 1360 bp 71.32 3.97 98.38
04302015_21_scaffold_26432
Species: Corallococcus coralloides (50%)
2 1233 bp 67.15 3.41 85.64
04302015_21_scaffold_17624
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (50%)
2 1535 bp 68.34 7.04 100.07
04302015_21_scaffold_33120
Species: Geobacter sp. OR-1 (50%)
2 1089 bp 67.31 3.31 68.04
04302015_21_scaffold_22312
Species: GWA2_Deltaproteobacteria_65_63_curated (50%)
2 1351 bp 61.81 3.77 66.17
04302015_21_scaffold_21465
Species: Geobacter pickeringii (50%)
2 1380 bp 66.23 3.80 94.13
04302015_21_scaffold_28338
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (50%)
2 1187 bp 68.32 4.68 89.97
04302015_21_scaffold_10234
Species: Stigmatella aurantiaca (50%)
2 2020 bp 65.84 4.98 90.74
04302015_21_scaffold_31306
Species: delta proteobacterium NaphS2 (50%)
2 1124 bp 66.90 3.47 94.75
04302015_21_scaffold_31818
Species: CG_Delta_02 (50%)
2 1114 bp 72.08 5.79 99.64
04302015_21_scaffold_55100
Species: CG_Delta_07 (50%)
2 1233 bp 70.88 7.06 100.24
04302015_21_scaffold_7388
Species: RifOxyA12_full_Proteobacteria_58_15_curated (50%)
2 2366 bp 60.65 3.55 90.03
04302015_21_scaffold_29175
Species: GWC2_Pelobacteraceae_58_13_curated (100%)
2 1169 bp 69.20 3.85 99.83
04302015_21_scaffold_20110
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (50%)
2 1430 bp 68.67 6.08 98.81
04302015_21_scaffold_27670
Species: Candidatus Entotheonella sp. TSY1 (50%)
2 1203 bp 69.24 4.74 87.78
04302015_21_scaffold_29176
Species: GWA2_Deltaproteobacteria_65_63_curated (50%)
2 1169 bp 68.26 6.29 100.09
04302015_21_scaffold_32671
Species: Candidatus Entotheonella sp. TSY2 (100%)
2 1097 bp 66.27 6.15 83.14
04302015_21_scaffold_16391
Species: CG_Delta_02 (100%)
2 1594 bp 62.80 4.05 90.72
04302015_21_scaffold_27671
Species: CG_Delta_02 (100%)
2 1203 bp 65.17 4.11 98.75
04302015_21_scaffold_20368
Species: R_Deltaproteobacteria_43_33 (50%)
2 1420 bp 65.28 3.70 98.87
04302015_21_scaffold_8840
Species: CG_Delta_02 (50%)
2 2172 bp 63.21 4.77 94.48
04302015_21_scaffold_10496
Species: CG_Syntroph_02 (50%)
2 1994 bp 63.79 4.36 89.97
04302015_21_scaffold_31056
Species: CG_Delta_02 (50%)
2 1129 bp 66.78 6.11 98.05
04302015_21_scaffold_26441
Species: RIFOXYD2_FULL_Deltaproteobacteria_66_9_curated (50%)
2 1233 bp 70.48 5.96 82.97
04302015_21_scaffold_25977
Species: CG_Delta_02 (50%)
2 1245 bp 65.70 5.06 100.96
04302015_21_scaffold_5818
Species: Corallococcus coralloides (50%)
2 2661 bp 64.64 5.92 100.00
04302015_21_scaffold_18682
Species: RLO_Deltaproteobacteria_60_19 (50%)
2 1484 bp 69.34 7.58 88.34
04302015_21_scaffold_5819
Species: CG_Delta_02 (100%)
2 2661 bp 71.48 5.92 96.96
04302015_21_scaffold_36811
Species: RIFOXYD2_FULL_Deltaproteobacteria_66_9_curated (100%)
2 1027 bp 59.49 3.51 100.20
04302015_21_scaffold_36044
Species: CG_Delta_02 (50%)
2 1038 bp 64.84 5.64 88.44
04302015_21_scaffold_16908
Species: CG_Syntroph_01 (50%)
2 1568 bp 70.85 3.92 90.69
Displaying items 701-750 of 1138 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.