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04302015_21_Deltaproteobacteria_66_5

In projects: 04302015_21

Consensus taxonomy: Deltaproteobacteria  →  Proteobacteria  →  Bacteria

Metagenomic Context

Parent: 04302015_21_UNK

Properties

Avg. coverage: 4.97 Longest contig: 6.25 Kbp Bin length: 1.86 Mbp GC content: 66.49 %
Contigs count: 1138 Features count: 2417 rRNAs count: 0 tRNAs count: 5

Genome completeness

partial RP 28 / 55 MC: 2 BSCG 31 / 51 MC: 3 ASCG 10 / 38 MC: 4
Displaying items 801-850 of 1138 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
04302015_21_scaffold_20398
Species: Desulfobacca acetoxidans (50%)
2 1932 bp 63.30 5.75 88.98
04302015_21_scaffold_27959
Species: CG_Delta_07 (50%)
2 1849 bp 64.47 4.38 72.36
04302015_21_scaffold_33416
Species: CG_Delta_02 (50%)
2 1083 bp 63.07 3.05 100.28
04302015_21_scaffold_34656
Species: RBG_16_Anaeromyxobacter_69_14_curated (50%)
2 1443 bp 67.98 6.76 102.50
04302015_21_scaffold_35697
Species: GWA2_Deltaproteobacteria_65_63_curated (50%)
2 1044 bp 63.79 3.88 97.13
04302015_21_scaffold_26219
Species: RBG_13_Deltaproteobacteria_65_10_curated (50%)
2 1239 bp 59.48 3.63 95.64
04302015_21_scaffold_12435
Species: CG_Delta_02 (100%)
2 1836 bp 69.66 4.25 96.90
04302015_21_scaffold_10532
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (50%)
2 1991 bp 66.50 5.58 99.45
04302015_21_scaffold_14133
Species: RIFOXYD2_FULL_Deltaproteobacteria_66_9_curated (50%)
2 1723 bp 67.27 5.05 93.50
04302015_21_scaffold_11725
Species: Smithella sp. SCADC (50%)
2 1889 bp 59.61 5.48 87.98
04302015_21_scaffold_22357
Species: CG_Delta_02 (50%)
2 1350 bp 67.48 4.11 95.33
04302015_21_scaffold_29983
Species: GWA2_Deltaproteobacteria_65_63_curated (50%)
2 1151 bp 64.47 5.73 84.71
04302015_21_scaffold_33934
Species: Cystobacter violaceus (50%)
2 1074 bp 71.79 5.31 101.40
04302015_21_scaffold_22614
Species: RBG_19FT_COMBO_Syntrophobacterales_59_10_curated (50%)
2 1341 bp 62.64 4.47 24.61
04302015_21_scaffold_23799
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (50%)
2 1304 bp 65.57 4.72 99.62
04302015_21_scaffold_34408
Species: Hyalangium minutum (50%)
2 1066 bp 61.35 2.95 103.00
04302015_21_scaffold_14137
Species: GWD2_Desulfuromonadales_61_12_curated (100%)
2 1723 bp 69.47 4.35 100.12
04302015_21_scaffold_4313
Species: delta proteobacterium NaphS2 (50%)
2 3087 bp 65.27 4.08 100.29
04302015_21_scaffold_37874
Species: RBG_16_Desulfobacca_58_9_curated (50%)
2 1009 bp 72.75 4.46 99.60
04302015_21_scaffold_30490
Species: CG_Delta_02 (50%)
2 1141 bp 71.17 5.26 98.86
04302015_21_scaffold_11474
Species: RBG_13_Deltaproteobacteria_58_19_curated (50%)
2 1910 bp 68.17 4.79 81.05
04302015_21_scaffold_12955
Species: Corallococcus coralloides (50%)
2 1799 bp 61.70 3.84 100.06
04302015_21_scaffold_33683
Species: Geobacter pickeringii (50%)
2 1078 bp 68.00 3.20 97.68
04302015_21_scaffold_9532
Species: GWA2_Deltaproteobacteria_65_63_curated (50%)
2 2094 bp 63.85 4.01 93.41
04302015_21_scaffold_35708
Species: CG_Delta_02 (100%)
2 1044 bp 69.35 7.61 100.29
04302015_21_scaffold_20157
Species: RBG_13_Deltaproteobacteria_65_10_curated (50%)
2 1428 bp 69.82 3.99 99.58
04302015_21_scaffold_7437
Species: RLO_Deltaproteobacteria_60_16 (50%)
2 2357 bp 62.92 4.84 85.41
04302015_21_scaffold_17677
Species: CG_Delta_02 (50%)
2 1532 bp 73.37 5.87 100.07
04302015_21_scaffold_11221
Species: CG_Delta_02 (100%)
2 1931 bp 68.67 5.67 94.77
04302015_21_scaffold_34925
Species: Desulfovibrio desulfuricans (50%)
2 1057 bp 62.72 3.69 98.49
04302015_21_scaffold_16437
Species: Desulfovibrio alkalitolerans (50%)
2 1592 bp 71.61 3.96 99.12
04302015_21_scaffold_38326
Species: GWA2_Deltaproteobacteria_65_63_curated (50%)
2 1002 bp 66.57 4.79 97.01
04302015_21_scaffold_30494
Species: CG_Delta_02 (100%)
2 1141 bp 64.68 3.68 85.19
04302015_21_scaffold_23294
Species: Geobacter sulfurreducens (50%)
2 1320 bp 64.85 3.86 98.86
04302015_21_scaffold_38071
Species: GWA2_Deltaproteobacteria_65_63_curated (50%)
2 1006 bp 67.50 5.37 101.39
04302015_21_scaffold_14399
Species: RIFOXYD2_FULL_Deltaproteobacteria_66_9_curated (50%)
2 1706 bp 62.08 4.13 75.26
04302015_21_scaffold_35455
Species: CG_Delta_02 (50%)
2 1048 bp 60.97 4.01 83.30
04302015_21_scaffold_4319
Species: Chondromyces apiculatus (50%)
2 3086 bp 67.56 4.28 99.25
04302015_21_scaffold_32208
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (50%)
2 1106 bp 64.47 3.66 95.48
04302015_21_scaffold_17425
Species: Syntrophus aciditrophicus (50%)
2 1544 bp 64.25 6.31 88.02
04302015_21_scaffold_18217
Species: Geobacter sulfurreducens (50%)
2 1506 bp 61.75 6.97 100.20
04302015_21_scaffold_23298
Species: CG_Delta_02 (50%)
2 1320 bp 67.88 5.45 97.73
04302015_21_scaffold_9795
Species: RBG_13_Deltaproteobacteria_58_19_curated (50%)
2 2065 bp 60.87 3.56 80.05
04302015_21_scaffold_33435
Species: RBG_16_Deltaproteobacteria_48_10_curated (50%)
2 1083 bp 63.71 4.16 96.12
04302015_21_scaffold_19507
Species: RBG_16_Deltaproteobacteria_49_23_curated (50%)
2 1453 bp 65.66 4.54 92.09
04302015_21_scaffold_22371
Species: Candidatus Entotheonella sp. TSY1 (50%)
2 1349 bp 70.72 6.34 97.18
04302015_21_scaffold_15317
Species: GWC2_Geobacteraceae_58_44_curated (50%)
2 1652 bp 60.96 4.54 98.79
04302015_21_scaffold_15573
Species: RBG_13_Deltaproteobacteria_52_11b_curated (50%)
2 1638 bp 68.32 7.69 98.35
04302015_21_scaffold_28654
Species: CG_Delta_02 (50%)
2 1180 bp 65.00 4.96 96.86
04302015_21_scaffold_36353
Species: CG_Delta_02 (100%)
1 1033 bp 64.38 4.07 84.51
Displaying items 801-850 of 1138 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.