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04302015_21_Planctomycetia_64_5

In projects: 04302015_21  |  glencore

Consensus taxonomy: Planctomycetia  →  Planctomycetes  →  Bacteria

Metagenomic Context

Parent: 04302015_21_UNK

Properties

Avg. coverage: 5.19 Longest contig: 14.90 Kbp Bin length: 4.26 Mbp GC content: 63.92 %
Contigs count: 1537 Features count: 4182 rRNAs count: 0 tRNAs count: 10

Genome completeness

partial RP 39 / 55 MC: 2 BSCG 39 / 51 MC: 3 ASCG 9 / 38
Displaying items 1-50 of 1537 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
04302015_21_scaffold_18791
Species: Rhodopirellula maiorica (50%)
2 1480 bp 66.82 4.36 106.62
04302015_21_scaffold_27762
Species: Rhodopirellula sallentina (50%)
2 1200 bp 58.50 5.38 105.75
04302015_21_scaffold_46872
Species: RBG_16_Planctomycetes_64_12_curated (50%)
2 1387 bp 62.80 4.65 104.04
04302015_21_scaffold_3627
Order: Planctomycetales (60%)
5 3367 bp 63.41 5.26 103.80
04302015_21_scaffold_40076
Species: Pirellula staleyi (50%)
2 1637 bp 64.75 4.86 103.73
04302015_21_scaffold_72991
Class: Planctomycetia (100%)
3 1130 bp 64.69 6.24 103.54
04302015_21_scaffold_36079
Order: Planctomycetales (100%)
3 1551 bp 63.19 4.93 102.71
04302015_21_scaffold_12502
Species: Candidatus Kuenenia stuttgartiensis (50%)
2 1832 bp 61.84 4.26 102.68
04302015_21_scaffold_8548
Species: RBG_13_Planctomycetes_63_9_curated (50%)
4 3366 bp 59.21 4.63 102.50
04302015_21_scaffold_986
Species: RBG_13_Planctomycetes_63_9_curated (50%)
2 7499 bp 62.77 5.00 102.49
04302015_21_scaffold_15027
Species: Rhodopirellula baltica (50%)
2 2097 bp 64.14 4.01 102.43
04302015_21_scaffold_27197
Species: Pirellula staleyi (50%)
2 2033 bp 60.99 5.02 102.12
04302015_21_scaffold_7835
Species: Rhodopirellula europaea (50%)
2 2300 bp 71.17 4.24 102.00
04302015_21_scaffold_24682
Order: Planctomycetales (66.67%)
3 2088 bp 61.88 4.31 101.72
04302015_21_scaffold_17178
Species: Singulisphaera acidiphila (50%)
2 1555 bp 65.85 5.50 101.67
04302015_21_scaffold_3370
Species: Rhodopirellula baltica (50%)
2 4384 bp 64.37 5.54 101.28
04302015_21_scaffold_13959
Species: RBG_16_Planctomycetes_64_12_curated (50%)
2 1732 bp 68.24 6.32 101.16
04302015_21_scaffold_63957
Species: Pirellula staleyi (50%)
2 1492 bp 62.94 4.22 101.14
04302015_21_scaffold_45288
Species: RBG_16_Planctomycetes_64_12_curated (50%)
2 1608 bp 60.45 4.29 100.75
04302015_21_scaffold_8460
Species: Singulisphaera acidiphila (100%)
2 2624 bp 63.95 8.23 100.72
04302015_21_scaffold_19916
Species: RBG_13_Planctomycetes_63_9_curated (50%)
2 1437 bp 64.93 5.32 100.63
04302015_21_scaffold_33608
Species: Singulisphaera acidiphila (100%)
2 1080 bp 57.59 3.19 100.56
04302015_21_scaffold_32910
Species: Rhodopirellula maiorica (50%)
2 1092 bp 59.89 5.08 100.55
04302015_21_scaffold_38260
Species: Singulisphaera acidiphila (50%)
2 1003 bp 65.00 3.74 100.50
04302015_21_scaffold_20582
Species: Singulisphaera acidiphila (100%)
2 1412 bp 65.79 5.52 100.50
04302015_21_scaffold_67604
Class: Planctomycetia (66.67%)
3 1138 bp 64.67 4.61 100.44
04302015_21_scaffold_1673
Species: Singulisphaera acidiphila (75%)
4 4941 bp 65.55 4.74 100.43
04302015_21_scaffold_7101
Species: RBG_16_Planctomycetes_64_12_curated (50%)
2 2412 bp 63.93 6.65 100.37
04302015_21_scaffold_5791
Species: Pirellula staleyi (50%)
2 2667 bp 68.02 6.97 100.34
04302015_21_scaffold_25244
Species: Singulisphaera acidiphila (100%)
2 1265 bp 63.95 6.76 100.32
04302015_21_scaffold_4083
Class: Planctomycetia (66.67%)
3 3176 bp 65.21 5.20 100.32
04302015_21_scaffold_30947
Species: RBG_13_Planctomycetes_63_9_curated (50%)
2 1131 bp 63.04 3.58 100.27
04302015_21_scaffold_20228
Species: Pirellula staleyi (50%)
2 1425 bp 68.07 5.89 100.21
04302015_21_scaffold_20069
Species: Blastopirellula marina (50%)
2 1431 bp 66.46 6.29 100.21
04302015_21_scaffold_34448
Species: RBG_16_Planctomycetes_64_10_curated (50%)
2 1066 bp 67.35 6.47 100.19
04302015_21_scaffold_28001
Species: Blastopirellula marina (50%)
2 1195 bp 64.10 5.02 100.17
04302015_21_scaffold_25593
Species: Gimesia maris (50%)
2 1255 bp 63.43 5.62 100.16
04302015_21_scaffold_24532
Species: RBG_16_Planctomycetes_64_10_curated (50%)
2 1285 bp 59.84 4.20 100.16
04302015_21_scaffold_32633
Species: RBG_16_Planctomycetes_64_10_curated (50%)
2 1378 bp 63.43 4.57 100.15
04302015_21_scaffold_8569
Species: RBG_16_Planctomycetes_64_12_curated (50%)
2 2205 bp 62.59 3.88 100.14
04302015_21_scaffold_16405
Species: Singulisphaera acidiphila (50%)
2 1594 bp 66.31 3.39 100.13
04302015_21_scaffold_11896
Species: RBG_16_Planctomycetes_64_12_curated (50%)
2 1876 bp 66.58 4.48 100.11
04302015_21_scaffold_32846
Species: Pirellula staleyi (50%)
2 1094 bp 65.54 4.11 100.09
04302015_21_scaffold_7931
Species: Singulisphaera acidiphila (50%)
2 2287 bp 63.05 4.66 100.09
04302015_21_scaffold_16315
Species: Singulisphaera acidiphila (50%)
2 2323 bp 61.90 4.78 100.09
04302015_21_scaffold_28881
Species: Planctopirus limnophila (50%)
2 1175 bp 63.83 4.98 100.09
04302015_21_scaffold_27694
Species: Gimesia maris (100%)
2 1202 bp 63.73 3.87 100.08
04302015_21_scaffold_6636
Species: Singulisphaera acidiphila (50%)
2 2497 bp 68.68 5.59 100.08
04302015_21_scaffold_25123
Class: Planctomycetia (66.67%)
3 1268 bp 65.77 4.38 100.08
04302015_21_scaffold_24581
Species: Rhodopirellula maiorica (50%)
2 1283 bp 66.17 3.98 100.08
Displaying items 1-50 of 1537 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.