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04302015_24_scaffold_23_4

Organism: 04302015_24_Sphingobacteria_36_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 2 ASCG 13 / 38
Location: comp(4183..4746)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9P2_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 60.0
  • Coverage: 180.0
  • Bit_score: 220
  • Evalue 1.10e-54
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 60.0
  • Coverage: 180.0
  • Bit_score: 220
  • Evalue 3.50e-55
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 98.4
  • Coverage: 188.0
  • Bit_score: 363
  • Evalue 1.50e-97

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Taxonomy

RIFOXYD2_FULL_Sphingobacteria_35_12_curated → Sphingobacteria → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 564
GTGATTCAACAAACATTTAAACATATCACTGATATAGAACTTTTAAAGAAGTTTCAAACCGACCAAAATAAGGAGTGGTTAGGTATTTTGCTTCAACGTTATACGATGTTATTGCTTGGAGTATGCATGAAGTACCTCAAAAACGAGGAAGAAGCCAAAGACGCTGTTCAACAAATATTTTTAAAAGCACTTAGTGAGTTAGAAAAATACCAAGTAGATTATCCGAAAAGCTGGCTATATAAAATTGCTTGTAATTACTGTTTAATGAAGCTTAGAGACCAAAAAACATATCTATCCATAGATAATGAAACAATTTTAGCAGAAACAATAGAACAAGACAATACTTCAACTATTGAAAAGGAAATAAACTTAAACTTATTAGAAGCTGCAATTGAAGAACTCAATAAAGAGCAAAAAACTTGTATAACTTTATTTTATCTTCAAAAGAAAAGTTACCAGCAAATAAGCTCAATTACCGGATTAAGTTTATTGCAAGTAAAAAGCAGTATTCAGAATGGTAAAAGAAATTTGAAAATTTTAATGGAGAAAAAACAATCTTTTTAA
PROTEIN sequence
Length: 188
VIQQTFKHITDIELLKKFQTDQNKEWLGILLQRYTMLLLGVCMKYLKNEEEAKDAVQQIFLKALSELEKYQVDYPKSWLYKIACNYCLMKLRDQKTYLSIDNETILAETIEQDNTSTIEKEINLNLLEAAIEELNKEQKTCITLFYLQKKSYQQISSITGLSLLQVKSSIQNGKRNLKILMEKKQSF*