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04302015_37_Hypocreales_59_5

In projects: 04302015_37

Consensus taxonomy: Hypocreales  →  Hypocreomycetidae  →  Ascomycota  →  Fungi

Metagenomic Context

Parent: 04302015_37_UNK

Properties

Avg. coverage: 5.05 Longest contig: 32.00 Kbp Bin length: 24.76 Mbp GC content: 59.32 %
Contigs count: 6209 Features count: 26714 rRNAs count: 1 tRNAs count: 50

Genome completeness

partial RP 39 / 55 MC: 28 BSCG 20 / 51 MC: 6 ASCG 26 / 38 MC: 8
Displaying items 51-100 of 6209 in total
contig # features sequence size GC content (%) Cov Coding Density (%) notes
04302015_37_scaffold_386
Order: Hypocreales (55.56%)
18 18304 bp 61.99 5.09 68.21
04302015_37_scaffold_1423 17 12442 bp 61.03 4.93 55.12
04302015_37_scaffold_1435 17 11665 bp 59.03 5.00 59.49
04302015_37_scaffold_1968
Class: Hypocreomycetidae (52.94%)
17 15087 bp 57.00 5.23 71.45
04302015_37_scaffold_502 17 16992 bp 57.59 5.02 79.24
04302015_37_scaffold_1742
Phylum: Ascomycota (52.94%)
17 8273 bp 59.16 4.86 81.55
04302015_37_scaffold_511 17 9419 bp 60.23 4.70 86.19
04302015_37_scaffold_1831 17 10126 bp 59.94 4.81 70.01
04302015_37_scaffold_855 17 12358 bp 57.81 5.01 54.28
04302015_37_scaffold_1081 17 8731 bp 60.78 5.15 67.66
04302015_37_scaffold_415 16 10792 bp 61.10 5.32 79.25
04302015_37_scaffold_971
Order: Hypocreales (62.5%)
16 12837 bp 58.60 4.71 83.01
04302015_37_scaffold_3161 16 10776 bp 60.53 5.64 63.53
04302015_37_scaffold_474
Order: Hypocreales (56.25%)
16 9619 bp 56.60 4.40 69.71
04302015_37_scaffold_489 16 9518 bp 52.90 5.03 62.63
04302015_37_scaffold_2773 16 14350 bp 59.64 4.68 57.18
04302015_37_scaffold_494 16 13703 bp 61.02 5.19 76.52
04302015_37_scaffold_2780
Phylum: Ascomycota (56.25%)
16 12769 bp 59.17 5.15 67.17
04302015_37_scaffold_520 16 9274 bp 63.41 5.19 63.24
04302015_37_scaffold_1248 16 12140 bp 59.13 4.58 61.33
04302015_37_scaffold_6209 16 6699 bp 62.08 5.46 75.82
04302015_37_scaffold_282
Phylum: Ascomycota (50%)
16 12124 bp 53.27 4.97 60.92
04302015_37_scaffold_547
Order: Hypocreales (75%)
16 12648 bp 58.02 4.36 77.89
04302015_37_scaffold_4565 16 8117 bp 59.78 5.45 64.05
04302015_37_scaffold_569
Order: Hypocreales (68.75%)
16 10867 bp 58.76 4.71 81.58
04302015_37_scaffold_1050 16 9963 bp 54.11 4.70 59.41
04302015_37_scaffold_2351 16 7086 bp 61.74 4.87 72.57
04302015_37_scaffold_842 16 12451 bp 59.95 4.95 78.79
04302015_37_scaffold_2126
Order: Hypocreales (56.25%)
16 13456 bp 62.89 5.08 65.35
04302015_37_scaffold_1103
Order: Hypocreales (62.5%)
16 13629 bp 58.69 5.02 72.77
04302015_37_scaffold_390 16 10469 bp 59.61 4.60 42.64
04302015_37_scaffold_5571 15 7148 bp 57.93 4.85 62.63
04302015_37_scaffold_426 15 10116 bp 60.50 5.19 77.28
04302015_37_scaffold_945
Phylum: Ascomycota (53.33%)
15 11220 bp 56.35 4.79 66.60
04302015_37_scaffold_450
Phylum: Ascomycota (53.33%)
15 10918 bp 60.29 4.78 57.32
04302015_37_scaffold_1957 15 13090 bp 61.52 5.36 67.15
04302015_37_scaffold_2238 15 8483 bp 59.72 5.66 72.21
04302015_37_scaffold_2242 15 7919 bp 63.49 5.02 69.48
04302015_37_scaffold_736
Order: Hypocreales (53.33%)
15 15667 bp 57.62 4.61 59.90
04302015_37_scaffold_2504
Order: Hypocreales (53.33%)
15 10427 bp 55.67 5.27 56.10
04302015_37_scaffold_765 15 9603 bp 59.46 5.11 70.54
04302015_37_scaffold_1757 15 10202 bp 59.34 5.18 74.07
04302015_37_scaffold_5446
Phylum: Ascomycota (66.67%)
15 8664 bp 55.10 4.59 51.97
04302015_37_scaffold_287 15 12003 bp 58.01 5.50 49.66
04302015_37_scaffold_546
Order: Hypocreales (66.67%)
15 11769 bp 59.88 4.51 61.46
04302015_37_scaffold_291 15 12349 bp 60.56 5.85 54.37
04302015_37_scaffold_1543
Phylum: Ascomycota (53.33%)
15 15774 bp 59.79 5.23 47.11
04302015_37_scaffold_597 15 8699 bp 62.82 4.45 75.66
04302015_37_scaffold_1331 15 8156 bp 59.55 4.58 67.62
04302015_37_scaffold_605
Order: Hypocreales (60%)
15 8644 bp 59.08 4.75 70.56
Displaying items 51-100 of 6209 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.