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bjp_ig2157_scaffold_4296_4

Organism: BJP_Ig2157_Hor_140_2014_Rhodobacterales_69_94

near complete RP 48 / 55 MC: 1 BSCG 44 / 51 ASCG 11 / 38 MC: 1
Location: comp(3099..3707)

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=35806 species="Bac similarity UNIPROT
DB: UniProtKB
  • Identity: 46.4
  • Coverage: 179.0
  • Bit_score: 139
  • Evalue 5.00e-30
2'-5' RNA ligase (EC:6.5.1.-) similarity KEGG
DB: KEGG
  • Identity: 44.3
  • Coverage: 185.0
  • Bit_score: 132
  • Evalue 1.20e-28
2'-5' RNA ligase n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) RepID=Q3J3T1_RHOS4 similarity UNIREF
DB: UNIREF100
  • Identity: 44.3
  • Coverage: 185.0
  • Bit_score: 132
  • Evalue 4.30e-28

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Taxonomy

Rhodovulum sulfidophilum → Rhodovulum → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 609
ATGATCCGCGCCTTCGTGGCGATCACGCCGCCCGTTGCGGTCTGCGACGCGCTGATTGCTGCGCAGGAAGGGCTGCCGCAGGGCTGGCGCGCAGCCGACGAGGCGCAGTTTCACCTGACGCTCGTCTTTCTCGGCGCGCTTTCGCGGCCCGACCTGGAGGATGTGGCCCTGGCACTCGCCGCGCTGCGCGGCGCACCCTTCCGGCTGCAGCTCTCGGGCTTCGGAGCGTTCGGCGGAGCCGAGCCTCGCACGCTCTGGGCCGGGTTTGCCCCCTGCCCGGCGCTCGCGGCCCTTCAGGCGCAGGTGGCGCAGGCCGCGCGCGGTGCGGGCGTGGAGATCGAACGGCGGCGGTTCACCCCACACCTCACGCTGGCGCGCACGCAGGGCCGCCCGGGGCGGGTTGAAACGGAGCGCTGGATCGCGCGCCACGCGGGACTCGACGGGCCGGAGTGGGTGGTGAACGCCTTCGGCCTCTGGCGCTCGGAGCTTGGCCGCCACGGGGCGGTGCACACACTGCTCGACGAGTATCCGCTGGGCTGCCCCGGGCTGAACGCAGACGGGCCCGGGGATGTGCCCCGGGCCCGCCGCCGACGCCTGCGCACGGTTTAA
PROTEIN sequence
Length: 203
MIRAFVAITPPVAVCDALIAAQEGLPQGWRAADEAQFHLTLVFLGALSRPDLEDVALALAALRGAPFRLQLSGFGAFGGAEPRTLWAGFAPCPALAALQAQVAQAARGAGVEIERRRFTPHLTLARTQGRPGRVETERWIARHAGLDGPEWVVNAFGLWRSELGRHGAVHTLLDEYPLGCPGLNADGPGDVPRARRRRLRTV*