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bjp_ig2157_scaffold_3890_4

Organism: BJP_Ig2157_Hor_140_2014_Rhodobacterales_69_94

near complete RP 48 / 55 MC: 1 BSCG 44 / 51 ASCG 11 / 38 MC: 1
Location: comp(2434..3192)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Burkholderia sp. WSM4176 RepID=UPI00037B5B26 similarity UNIREF
DB: UNIREF100
  • Identity: 49.1
  • Coverage: 171.0
  • Bit_score: 148
  • Evalue 7.30e-33
DNA-directed RNA polymerase specialized sigma subunit, sigma24-like protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 47.8
  • Coverage: 180.0
  • Bit_score: 160
  • Evalue 4.40e-36
FecI-like sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 42.6
  • Coverage: 230.0
  • Bit_score: 144
  • Evalue 3.00e-32

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Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 759
ATGCCACAAAAGGGCACGCGGACATTCCGCCTCACGCGTAAGTTAATTCGCAGGCCGCCCCAGGAAGGTTACACCTCGGATGCGAAGACCGGGAAAAACCGCGCACCGGCCAAAACCGACAGGGAAGAAACCGTGGCTGCCATCGAAGGCTTCCTGAACGAGAACGTCGACGCACGACCCGTGCAGGCGGCGGACGACCCGCTGGGCGCGCTCATGCAGGCCGCACAATCAGGTGACCGCGGCGCCTACCGCAGCCTGCTCGAGCGGCTGACGCTGCGGCTGCGCCTCCTGATACGGCGGCGCGCGCCCTGGCTCGATCGCGACGAGATCGAGGACCTGGTGCAGGAAACTCTCATCTCGGTGCATCTCGCCCGTGCCAGCTACGATCCGGCACGTCCCTTCCTGCCATGGCTTGCCACGATCGCCCGCTGCCGCATCGCCGATGCCGCGCGCGCTTACGGGCGCCGTGCGGCGCTTGATGTCGCGATGTCGGAAAGCGTTGAAACCTTTTGCAGCGCGGCAACGAATAACCATGCCGAGAACGTGGTGAATTTCCTCGCCGTGCGGCGCGCACTCGGCACGCTGAGCCCGGCGGAGAGGGACGCGCTCTCAATGCTGAGGCTCAGGCAATTGACCCTGTCCGAGGCATCAGAGGAAAGCGGCACCAGCGTGGCCGCGCTGAAGGTGGCGGTGCATCGCGCAGGCAAGCGGCTGCGCGGCGTGCTGGAAGGAGAGAACCCGGATGAGGCGCACAGATGA
PROTEIN sequence
Length: 253
MPQKGTRTFRLTRKLIRRPPQEGYTSDAKTGKNRAPAKTDREETVAAIEGFLNENVDARPVQAADDPLGALMQAAQSGDRGAYRSLLERLTLRLRLLIRRRAPWLDRDEIEDLVQETLISVHLARASYDPARPFLPWLATIARCRIADAARAYGRRAALDVAMSESVETFCSAATNNHAENVVNFLAVRRALGTLSPAERDALSMLRLRQLTLSEASEESGTSVAALKVAVHRAGKRLRGVLEGENPDEAHR*