ggKbase home page

bjp_ig2157_scaffold_11340_1

Organism: BJP_Ig2157_Hor_140_2014_Rhodobacterales_69_94

near complete RP 48 / 55 MC: 1 BSCG 44 / 51 ASCG 11 / 38 MC: 1
Location: comp(2..2314)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' n=4 Tax=Rhodobacter RepID=RPOC_RHOS1 similarity UNIREF
DB: UNIREF100
  • Identity: 83.4
  • Coverage: 795.0
  • Bit_score: 1309
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 83.4
  • Coverage: 795.0
  • Bit_score: 1309
  • Evalue 0.0
Tax=BJP_IG2158_Rhodobacterales_69_12 similarity UNIPROT
DB: UniProtKB
  • Identity: 84.0
  • Coverage: 795.0
  • Bit_score: 1323
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

BJP_IG2158_Rhodobacterales_69_12 → Defluviimonas → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2313
ATGCTCGACATGACGCTGCGCGATCTGGAGCGCATCCTCTATTTCGAGAACTATGTCGTCATCGAGCCGGGACTCACCGATCTCACCTACGGCCAGCTTCTGACCGAGGAAGAGTTCATGGATGCCGAGGACCAGTATGGCGGTGACGCCTTCACCGCCGGGATCGGCGCGGAAGCCATTCGCGACATGCTGGCCCAGATCGACCTCGAGGCCGAGGCCGTGCGGCTGCGCGAGGAGCTGTCCGAGGCGACCGGAGAGCTGAAGCCCAAGAAGATCATCAAGCGGCTGAAGGTCGTCGAGCAGTTCCTCGAGTCGGGCAACCGGCCCGAGTGGATGGTGCTGACCGTGCTGCCGGTTATTCCGCCCGAGCTGCGCCCGCTGGTGCCGCTCAAGCGGCTCATCGAGCTGCGGGCGCCCGACATCATCATCCGCAACGAGAAGCGGATGCTGCAGGAATCGGTCGATGCACTCTTCGACAACGGACGCCGCGGGCGGGTGATCACCGGCTCGAACAAGCGGCCGCTGAAATCGCTCTCGGACATGCTGAAGGGCAAGCAGGGTCGCTTCCGCCAGAACCTTCTGGGCAAGCGGGTCGATTTCTCGGGCCGCTCGGTGATCGTGACCGGACCGGAGCTGAAGCTGCACCAGTGCGGACTGCCCAAGAAGATGGCGCTGGAGCTCTTCAAGCCCTTCATCTACTCGCGGCTCGAGGCGAAAGGGCTCTCCAGCACCGTCAAGCAGGCCAAGAAGCTGGTCGAGAAGGAACGCCCCGAGGTATGGGATCTGCTCGACGAGGTGATCCGCGAGCATCCCGTCCTGCTCAACCGCGCGCCGACGCTGCACCGGCTCGGTATCCAGGCCTTCGAGCCGATCCTGATCGAGGGCAAGGCGATCCAGCTTCACCCGCTTGTCTGCGCCGCCTTCAACGCCGATTTCGACGGCGACCAGATGGCGGTGCATGTGCCGCTTTCGCTCGAGGCTCAGCTCGAGGCGCGGGTGCTGATGATGAGCACCAACAACGTGCTCAGCCCTGCGAACGGCAAGCCGATCATCGTGCCGAGTCAGGACATGATCCTGGGGCTCTACTACATCACGATGCTGCGCGAGGGCATGAAGGGCGAGGGCATGGCCTTCGCGGGACCCGAAGAGGTGGAGCACGCGCTCGACGCGGGCGAGGTGCATCTGCATGCGCGCGTCATTTGTCGGCTGCGTCAGGTCGATGACGAGGGCAACATCGTCATGCGCCGCTTCGAGACGACCCCGGGCCGGGTGCGGCTGGGTGCGCTGCTGCCGCTCAACGCCAAGACGCCCTTCGACGTGGTCAACCGGCTCCTGCGCAAGAAGGAGGTGGGCGAGGTCATCGACACCGTCTACCGCTACTGCGGGCAGAAGGAGAGCGTGATCTTCTGCGACCAGATCATGGGTCTCGGTTTCCGCGAGGCATTCCGCGCCGGCATCAGCTTCGGCAAGGACGATATGCTGATCCCCGAGTCGAAGTGGGAGATCGTGAACCGCACCCGCGATCAGGTGAAGGAGTTCGAGCAGCAATACATGGACGGGCTGATCACCCAGGGCGAGAAATACAACAAGGTGGTTGATGCCTGGTCGCAATGCTCCGACGAGGTGGCGACGGCCATGATGGCCGAGATCTCCGCCGTGCGGAAGGACGAGAACGGCGCCGAACTGGAGCCGAACTCGGTCTACATGATGTCGCACTCGGGCGCGCGGGGCTCGCCCGCACAGATGAAGCAGTTGGGCGGCATGCGCGGGTTGATGGCCAAGCCCTCGGGCGAGATCATCGAGACGCCGATCATCTCCAACTTCAAGGAAGGCCTCACCGTGCTGGAGTATTTCAACTCCACCCACGGGGCGCGCAAGGGTCTGGCCGATACGGCGCTGAAGACCGCCAACTCGGGCTATCTGACGCGGCGTCTGGTCGATGTGTCGCAGGACTGCATCGTGCGCCTGCACGACTGCGGCACCGAGCGCGGCATCACCGCGGTGGCGGCGTTGCGCGACGGCGAGATGGTCTCGAGTCTCGGAGAGCGCGTGCTGGGGCGCGTGCCGGTCGAGGATGTGCTTGAGCCGGGCAGCGACCGGGTGCTGGCGCGGGTGGGCGAGCTGATCGACGAGCGCACCGCCGACGAGATCGACGCGCTCGGCGTCATCTCGGCGCGCATCCGTTCGCCGCTGACCTGCGAGTCAGACGATGGCGTCTGCGCGCTCTGCTATGGGCGCGATCTGGCGCGCGGCACGCTGGTCAACGTGGGCGAGGCGGTGGGGATCATCGCCGCGCAGTCGATCGGTGAGCCG
PROTEIN sequence
Length: 771
MLDMTLRDLERILYFENYVVIEPGLTDLTYGQLLTEEEFMDAEDQYGGDAFTAGIGAEAIRDMLAQIDLEAEAVRLREELSEATGELKPKKIIKRLKVVEQFLESGNRPEWMVLTVLPVIPPELRPLVPLKRLIELRAPDIIIRNEKRMLQESVDALFDNGRRGRVITGSNKRPLKSLSDMLKGKQGRFRQNLLGKRVDFSGRSVIVTGPELKLHQCGLPKKMALELFKPFIYSRLEAKGLSSTVKQAKKLVEKERPEVWDLLDEVIREHPVLLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQLEARVLMMSTNNVLSPANGKPIIVPSQDMILGLYYITMLREGMKGEGMAFAGPEEVEHALDAGEVHLHARVICRLRQVDDEGNIVMRRFETTPGRVRLGALLPLNAKTPFDVVNRLLRKKEVGEVIDTVYRYCGQKESVIFCDQIMGLGFREAFRAGISFGKDDMLIPESKWEIVNRTRDQVKEFEQQYMDGLITQGEKYNKVVDAWSQCSDEVATAMMAEISAVRKDENGAELEPNSVYMMSHSGARGSPAQMKQLGGMRGLMAKPSGEIIETPIISNFKEGLTVLEYFNSTHGARKGLADTALKTANSGYLTRRLVDVSQDCIVRLHDCGTERGITAVAALRDGEMVSSLGERVLGRVPVEDVLEPGSDRVLARVGELIDERTADEIDALGVISARIRSPLTCESDDGVCALCYGRDLARGTLVNVGEAVGIIAAQSIGEP