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bjp_ig2157_scaffold_12455_1

Organism: BJP_Ig2157_Hor_140_2014_Rhodobacterales_69_94

near complete RP 48 / 55 MC: 1 BSCG 44 / 51 ASCG 11 / 38 MC: 1
Location: 3..1568

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 80.7
  • Coverage: 529.0
  • Bit_score: 857
  • Evalue 7.10e-246
rpoC; DNA-directed RNA polymerase beta' subunit (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 81.0
  • Coverage: 522.0
  • Bit_score: 840
  • Evalue 2.30e-241
DNA-directed RNA polymerase subunit beta n=3 Tax=Rhodobacter capsulatus RepID=V8H783_RHOCA similarity UNIREF
DB: UNIREF100
  • Identity: 81.4
  • Coverage: 521.0
  • Bit_score: 842
  • Evalue 2.90e-241

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Taxonomy

Defluviimonas sp. 20V17 → Defluviimonas → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1566
TGCGCGCTCTGCTATGGGCGCGATCTGGCGCGCGGCACGCTGGTCAACGTGGGCGAGGCGGTGGGGATCATCGCCGCGCAGTCGATCGGTGAGCCGGGGACACAGCTCACCATGCGCACCTTCCATATCGGCGGCATCGCGCAGGGCAGCCAGCAATCCTCGCTCGAGGCGAGCCAGCCGGGCACCGTCTCGTTCCGCAATCCGACACTACTGCCCAACCGTGCGGGCGAGCAGATCGTGATGGGCCGCAACATGCAGATCGTGATTGCCGACGAGCATGGCGTGGAGCGGGCGGCGCACAAGATGGGCTACGGCTCGAAGGTGCTCGTGAAGGAAGGCCAGGAAGTCAAGCGCGGCACCAAGCTCTTCGAGTGGGATCCCTACACGCTGCCGATCATTGCCGAAAAGTCGGGCGTTCTGCGTTTCGTCGATCTCTCGACCGGCGTCACCGTGCGCGAGGAAACCGACGAGGCCACCGGCATGACGCAGAAGATCGTCACCGACTGGCGCACTGCGCCGCGCGGCAATGCGCTGAAGCCCGAGATCATCGTCATGGACGCGGAAACCGGTGATCCGGTGCGCAACGACCAGGGCAACCCGGTGACCTATCCGATGTCGGTCGATGCGATCCTGTCGTCGGAGGATGGCCAGGACGTGCAGGCGGGCGACGTGATCGCACGGATTCCGCGCGAAGGCGCCAAGACCAAGGACATCACCGGCGGTCTGCCGCGAGTGGCCGAGCTTTTCGAGGCGCGCCGTCCCAAGGATCACGCGATCATCGCCGAGATCGACGGCTACGTGCGTTTCGGCAAGGACTACAAGAACAAGATCCGCCTCACCATCGAGCCAACCGACGACACGCATGAGCCGGTGGAATACATGCTGCCCAAGGGAAAGCACATTCCCGTGCAGGACGGCGATTTTGTTCAGCGCGGCGAATATCTGATGGACGGCAACCCGGCGCCTCACGACATCCTGCGCATTCTCGGGGTCGAGGCGCTGGCCAACTACCTTGTCGACGAGGTGCAGGACGTCTACCGGCTTCAGGGTGTGAAGATCAATGACAAGCACATCGAGGTCATCGTCCGGCAGATGCTCCAGAAGTGGGAGATCACCGAATCCGGCGACACGACGCTTCTGAAGGGCGAGCAGGTCGAGAAGATCGATCTCGAGGAAGAGAACGCCAAGGTCGAAGCGAAGGGCGGGCGGCCAGCGCAGGGCGAGCCGGTGCTGCTCGGCATCACCAAGGCGTCGCTGCAGACGCGCAGCTTCATCTCGGCGGCCTCCTTCCAGGAAACCACGCGGGTGCTGACCGAGGCCTCGGTGATGGGGAAGCGCGACAAGCTGGTTGGGCTCAAGGAGAACGTGATCGTCGGGCGGCTCATCCCGGCCGGCACGGGCGGAGCGGCCAGCAAACTGCGTCGCATCGCCTCCGAGCGCGACCAGAAGATCATCGCCCAGCGTCGCGCCGAGGCCGAGGCCGCCGCGGCGCTGGCCGCGCCGGTTATGGGCACCGAGGAAGACGGCGTCCTTGTCGATACGCCGGAATCGCGCGACGAGTTCTGA
PROTEIN sequence
Length: 522
CALCYGRDLARGTLVNVGEAVGIIAAQSIGEPGTQLTMRTFHIGGIAQGSQQSSLEASQPGTVSFRNPTLLPNRAGEQIVMGRNMQIVIADEHGVERAAHKMGYGSKVLVKEGQEVKRGTKLFEWDPYTLPIIAEKSGVLRFVDLSTGVTVREETDEATGMTQKIVTDWRTAPRGNALKPEIIVMDAETGDPVRNDQGNPVTYPMSVDAILSSEDGQDVQAGDVIARIPREGAKTKDITGGLPRVAELFEARRPKDHAIIAEIDGYVRFGKDYKNKIRLTIEPTDDTHEPVEYMLPKGKHIPVQDGDFVQRGEYLMDGNPAPHDILRILGVEALANYLVDEVQDVYRLQGVKINDKHIEVIVRQMLQKWEITESGDTTLLKGEQVEKIDLEEENAKVEAKGGRPAQGEPVLLGITKASLQTRSFISAASFQETTRVLTEASVMGKRDKLVGLKENVIVGRLIPAGTGGAASKLRRIASERDQKIIAQRRAEAEAAAALAAPVMGTEEDGVLVDTPESRDEF*