ggKbase home page

bjp_Ig5326_Hor_140_2015_Hydrogenophilales_65_5

bjp_ig5326_Hydrogenophilales_65_5
In projects: 07V140M03_2015_Ig5326  |  horonobe_genomes

Consensus taxonomy: Hydrogenophilales  →  Betaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 51-100 of 661 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
Ig5326_scaffold_17103
Species: GWE1_Thiobacillus_62_9_curated (50%)
2 1105 bp 64.80 6.24 86.06
Ig5326_scaffold_7522
Species: GWE1_Thiobacillus_62_9_curated (66.67%)
3 2722 bp 65.06 6.23 92.25
Ig5326_scaffold_15024
Species: GWE1_Thiobacillus_62_9_curated (50%)
2 1282 bp 61.15 6.20 56.16
Ig5326_scaffold_17317
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1089 bp 61.80 6.20 99.72
Ig5326_scaffold_11459
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1745 bp 60.17 6.19 55.87
Ig5326_scaffold_6323
Species: GWE1_Thiobacillus_62_9_curated (100%)
3 3227 bp 63.87 6.18 95.94
Ig5326_scaffold_11257
Species: GWE1_Thiobacillus_62_9_curated (100%)
2 1778 bp 64.74 6.16 90.94
Ig5326_scaffold_5618
Species: GWE1_Thiobacillus_62_9_curated (100%)
6 3606 bp 66.97 6.16 98.42
Ig5326_scaffold_5656
Species: GWE1_Thiobacillus_62_9_curated (100%)
4 3582 bp 62.62 6.16 94.89
Ig5326_scaffold_9318
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (60%)
5 2174 bp 60.49 6.14 87.76
Ig5326_scaffold_2239
Order: Hydrogenophilales (75%)
8 7461 bp 66.77 6.13 78.73
Ig5326_scaffold_6688
Species: GWE1_Thiobacillus_62_9_curated (50%)
4 3057 bp 65.49 6.13 98.33
Ig5326_scaffold_7037
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (80%)
5 2911 bp 65.54 6.13 88.53
Ig5326_scaffold_4665
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (80%)
5 4233 bp 68.93 6.13 99.15
Ig5326_scaffold_3548
Order: Hydrogenophilales (100%)
5 5248 bp 67.64 6.12 97.12
Ig5326_scaffold_12049
Order: Hydrogenophilales (100%)
3 1643 bp 59.53 6.12 84.54
Ig5326_scaffold_9701
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 2082 bp 65.66 6.12 93.66
Ig5326_scaffold_12387
Species: GWE1_Thiobacillus_62_9_curated (100%)
3 1592 bp 67.65 6.12 97.80
Ig5326_scaffold_3449
Species: GWE1_Thiobacillus_62_9_curated (50%)
6 5389 bp 64.63 6.12 94.08
Ig5326_scaffold_5408
Species: GWE1_Thiobacillus_62_9_curated (60%)
5 3723 bp 63.47 6.12 82.27
Ig5326_scaffold_7301
Order: Hydrogenophilales (100%)
5 2797 bp 63.00 6.11 79.48
Ig5326_scaffold_8988
Species: GWE1_Thiobacillus_62_9_curated (66.67%)
3 2259 bp 63.88 6.11 93.89
Ig5326_scaffold_7588
Species: GWE1_Thiobacillus_62_9_curated (50%)
4 2701 bp 63.42 6.11 75.97
Ig5326_scaffold_5951
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (66.67%)
3 3415 bp 66.41 6.11 99.62
Ig5326_scaffold_6071
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (50%)
6 3345 bp 63.50 6.10 81.88
Ig5326_scaffold_9776
Species: GWE1_Thiobacillus_62_9_curated (100%)
2 2065 bp 67.99 6.10 91.23
Ig5326_scaffold_9150
Order: Hydrogenophilales (50%)
4 2217 bp 57.42 6.09 81.87
Ig5326_scaffold_4888
Species: GWE1_Thiobacillus_62_9_curated (57.14%)
7 4066 bp 62.32 6.09 91.64
Ig5326_scaffold_9627
Order: Hydrogenophilales (100%)
3 2098 bp 69.21 6.08 92.52
Ig5326_scaffold_1935
Species: GWE1_Thiobacillus_62_9_curated (73.33%)
15 8292 bp 61.95 6.08 88.49
Ig5326_scaffold_2977
Order: Hydrogenophilales (100%)
7 6071 bp 65.77 6.08 93.54
Ig5326_scaffold_8928
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (100%)
2 2275 bp 68.97 6.07 94.95
Ig5326_scaffold_15546
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1235 bp 61.54 6.07 99.84
Ig5326_scaffold_10959
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (100%)
3 1830 bp 70.77 6.07 100.66
Ig5326_scaffold_10805
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1856 bp 66.38 6.06 81.47
Ig5326_scaffold_4967
Order: Hydrogenophilales (80%)
5 4013 bp 64.86 6.06 86.64
Ig5326_scaffold_7756
Species: Thiobacillus denitrificans (100%)
3 2647 bp 65.92 6.06 91.69
Ig5326_scaffold_17002
Species: GWE1_Thiobacillus_62_9_curated (100%)
1 1113 bp 61.55 6.06 78.44
Ig5326_scaffold_10792
Species: Thiobacillus denitrificans (100%)
1 1857 bp 62.63 6.06 99.84
Ig5326_scaffold_11658
Order: Hydrogenophilales (100%)
3 1711 bp 67.39 6.05 94.68
Ig5326_scaffold_3719
Species: GWE1_Thiobacillus_62_9_curated (50%)
6 5052 bp 64.90 6.03 95.49
Ig5326_scaffold_10247
Order: Hydrogenophilales (100%)
5 1966 bp 59.51 6.03 91.40
Ig5326_scaffold_6231
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (66.67%)
3 3265 bp 65.76 6.02 91.15
Ig5326_scaffold_7309
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (66.67%)
3 2793 bp 66.20 6.02 99.25
Ig5326_scaffold_948
Order: Hydrogenophilales (92.86%)
14 13496 bp 66.47 6.02 92.47
Ig5326_scaffold_3426
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (71.43%)
7 5411 bp 62.23 6.02 89.54
Ig5326_scaffold_1197
Order: Hydrogenophilales (92.31%)
13 11390 bp 65.77 6.01 92.87
Ig5326_scaffold_8768
Order: Hydrogenophilales (50%)
4 2320 bp 61.94 6.01 85.09
Ig5326_scaffold_6838
Species: GWE1_Thiobacillus_62_9_curated (100%)
4 2995 bp 63.94 6.01 97.26
Ig5326_scaffold_1004
Species: GWE1_Thiobacillus_62_9_curated (50%)
14 12940 bp 64.91 6.00 91.48
Displaying items 51-100 of 661 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.