ggKbase home page

07M_4_2014_scaffold_1733_9

Organism: 07m_4_Miz_z4_200_2014_Elusimicrobia_37_6

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 1 ASCG 10 / 38
Location: 10292..10867

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67R63_SYMTH similarity UNIREF
DB: UNIREF100
  • Identity: 43.0
  • Coverage: 179.0
  • Bit_score: 160
  • Evalue 1.40e-36
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 43.0
  • Coverage: 179.0
  • Bit_score: 160
  • Evalue 4.00e-37
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 60.3
  • Coverage: 184.0
  • Bit_score: 230
  • Evalue 2.00e-57

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD2_FULL_Elusimicrobia_34_15_curated → Elusimicrobia → Bacteria

Sequences

DNA sequence
Length: 576
GTGTACGAGGAAAACACCCTTATAGAAAAAGCAAAAAATGGTGATGTTACTGCCTTTGAAAAAATTATTTCAATCCACCAGGAAAAAATATATAATCTTGCATATCGTTTGACCGGGAATGAATCTGATGCAAGAGACCTCTCGCAAGATGTGATAATAAAAGTTTTTTGTTCTATAAAAAATTTTTATGGAAAATCAACATTTTCTACATGGTTATGGCGAATAATACACAATACCTTCATAGACGAATGTAAAAGTAAATACCGAAAAAACTCATCTCTAACAACCTCAATAGAAACGGTCTTTAATCTCACGGATGATAATAACCAGCCGGAAAAAGAAGCAGAAAAATCTGATTTACAACAACAAGTAAAACAATCTTTATTATCAATACCGCCAAAATACAGAATGGCAGTTGTTATGTACGATATGCAGGGATTTAGTTATAACGAAATTGCTGAAATCAGCAGAGTTTCTATGGGCACGGTGAAGTCAAGATTGAATCGCGGCAGGGAGTTATTAAGAAAAATAATTTTGAAATCGGGAACATTTTTTGAAACTAATCGTCTAACCTAA
PROTEIN sequence
Length: 192
VYEENTLIEKAKNGDVTAFEKIISIHQEKIYNLAYRLTGNESDARDLSQDVIIKVFCSIKNFYGKSTFSTWLWRIIHNTFIDECKSKYRKNSSLTTSIETVFNLTDDNNQPEKEAEKSDLQQQVKQSLLSIPPKYRMAVVMYDMQGFSYNEIAEISRVSMGTVKSRLNRGRELLRKIILKSGTFFETNRLT*