ggKbase home page

bjp_Ig7659_Hor_218_2015_Chloroflexi_56_5

bjp_ig7659_Chloroflexi_56_5
In projects: 08E140C01_z1_2015  |  chloroflexi  |  horonobe_genomes

Consensus taxonomy: Chloroflexi  →  Bacteria

Taxonomy override: Chloroflexi

Description

(YA)

Displaying items 1-50 of 430 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
Ig7659_scaffold_17257
Species: Dehalococcoides mccartyi (100%)
1 1000 bp 59.50 4.20 99.60
Ig7659_scaffold_17263
Species: CG_Anaero_02 (50%)
2 1000 bp 60.80 4.80 100.20
Ig7659_scaffold_17235
Phylum: Chloroflexi (66.67%)
3 1001 bp 53.25 3.75 99.20
Ig7659_scaffold_17199
Species: GWB2_Chloroflexi_54_36_curated (100%)
2 1003 bp 53.74 3.29 67.30
Ig7659_scaffold_17103
Species: GWB2_Chloroflexi_54_36_curated (100%)
1 1008 bp 50.79 2.68 94.05
Ig7659_scaffold_17052
Species: RBG_16_Chloroflexi_54_18_curated (100%)
1 1010 bp 67.82 4.16 99.80
Ig7659_scaffold_17024
Species: RBG_16_Chloroflexi_57_8_curated (100%)
1 1012 bp 54.64 18.82 83.00
Ig7659_scaffold_17025
Species: BJP_IG2069_Anaerolineales_43_63 (100%)
1 1012 bp 27.27 3.41 88.34
Ig7659_scaffold_16897
Species: RBG_13_Chloroflexi_46_9_curated (100%)
1 1017 bp 53.79 4.28 95.58
Ig7659_scaffold_16924
Species: RBG_16_Chloroflexi_48_7_curated (100%)
1 1017 bp 58.21 4.57 93.81
Ig7659_scaffold_16870
Species: RBG_13_Chloroflexi_48_17_curated (50%)
2 1018 bp 53.73 3.24 95.48
Ig7659_scaffold_16821
Species: RBG_13_Chloroflexi_46_14_curated (50%)
2 1021 bp 58.96 4.70 101.67
Ig7659_scaffold_16826
Species: Nitrolancea hollandica (50%)
2 1021 bp 62.78 5.29 95.20
Ig7659_scaffold_16799
Species: BJP_IG2069_Anaerolineales_43_63 (100%)
1 1022 bp 54.01 5.14 82.49
Ig7659_scaffold_16755
Species: Dehalococcoides mccartyi (100%)
1 1025 bp 58.63 3.22 99.80
Ig7659_scaffold_16709
Species: BJP_IG2158_Anaerolineales_38_74 (100%)
1 1028 bp 51.85 3.94 99.81
Ig7659_scaffold_16720
Species: BJP_IG2069_Anaerolineales_43_63 (100%)
1 1028 bp 50.29 8.17 51.65
Ig7659_scaffold_16542
Species: Anaerolinea thermophila (50%)
2 1037 bp 54.87 2.60 96.62
Ig7659_scaffold_16503
Species: RBG_16_Chloroflexi_56_11_curated (100%)
1 1039 bp 62.56 3.32 99.90
Ig7659_scaffold_16439
Species: GWC2_Chloroflexi_49_37_curated (100%)
1 1042 bp 51.06 3.89 97.02
Ig7659_scaffold_16382
Species: Dehalococcoides mccartyi (50%)
2 1045 bp 51.96 2.87 93.88
Ig7659_scaffold_16359
Species: Dehalococcoides mccartyi (50%)
2 1047 bp 57.31 4.73 95.42
Ig7659_scaffold_16284
Species: BJP_IG2069_Anaerolineales_43_63 (100%)
1 1050 bp 53.90 3.57 82.29
Ig7659_scaffold_16208
Species: GWB2_Chloroflexi_54_36_curated (100%)
1 1053 bp 54.13 2.56 96.30
Ig7659_scaffold_16220
Species: GWB2_Chloroflexi_54_36_curated (50%)
2 1053 bp 52.99 4.27 96.30
Ig7659_scaffold_16223
Species: GWB2_Chloroflexi_54_36_curated (100%)
2 1053 bp 62.30 3.13 98.29
Ig7659_scaffold_16196
Species: BJP_IG2158_Anaerolineales_38_74 (100%)
2 1054 bp 52.85 3.27 94.78
Ig7659_scaffold_16173
Species: RBG_16_Chloroflexi_51_9_curated (50%)
2 1055 bp 55.36 5.26 94.69
Ig7659_scaffold_16177
Species: BJP_IG2069_Anaerolineales_43_63 (100%)
1 1055 bp 50.62 4.41 99.81
Ig7659_scaffold_16129
Species: Dehalococcoides mccartyi (100%)
1 1057 bp 53.55 5.25 99.91
Ig7659_scaffold_16144
Species: RBG_13_Chloroflexi_68_17_curated (100%)
1 1057 bp 66.04 3.83 99.62
Ig7659_scaffold_16078
Species: RBG_13_Chloroflexi_54_9_curated (100%)
1 1059 bp 52.50 4.25 93.20
Ig7659_scaffold_16073
Species: RBG_13_Chloroflexi_46_14_curated (100%)
1 1060 bp 58.87 4.53 99.91
Ig7659_scaffold_16022
Species: RBG_13_Chloroflexi_50_10_curated (100%)
1 1064 bp 60.15 4.37 99.81
Ig7659_scaffold_15979
Species: Dehalococcoides sp. UCH007 (50%)
2 1066 bp 56.29 4.78 84.99
Ig7659_scaffold_15953
Species: Anaerolinea thermophila (100%)
1 1068 bp 53.84 3.65 100.00
Ig7659_scaffold_15936
Species: BJP_IG2069_Anaerolineales_43_63 (100%)
1 1068 bp 50.75 7.30 99.72
Ig7659_scaffold_15943
Species: RBG_16_Chloroflexi_57_11_curated (50%)
2 1068 bp 53.56 3.65 97.19
Ig7659_scaffold_15918
Species: RBG_13_Chloroflexi_46_9_curated (100%)
1 1069 bp 60.24 5.19 99.91
Ig7659_scaffold_15872
Species: uncultured Chloroflexi bacterium (100%)
2 1073 bp 52.84 3.63 79.68
Ig7659_scaffold_15839
Species: RBG_19FT_COMBO_Chloroflexi_48_23_curated (50%)
2 1074 bp 56.89 3.91 72.07
Ig7659_scaffold_15852
Species: BJP_IG2069_Anaerolineales_43_63 (100%)
1 1074 bp 57.17 4.75 100.00
Ig7659_scaffold_15859
Species: RBG_16_Chloroflexi_47_49_curated (100%)
1 1074 bp 58.66 3.07 100.00
Ig7659_scaffold_15807
Species: BJP_IG2069_Anaerolineales_43_63 (100%)
2 1076 bp 51.30 3.49 98.42
Ig7659_scaffold_15818
Species: RBG_13_Chloroflexi_56_8b_curated (100%)
1 1076 bp 57.71 4.74 99.81
Ig7659_scaffold_15779
Species: GWB2_Chloroflexi_54_36_curated (100%)
1 1078 bp 54.17 2.78 99.91
Ig7659_scaffold_15758
Order: Anaerolineales (66.67%)
3 1079 bp 61.35 3.48 101.48
Ig7659_scaffold_15738
Species: RBG_16_Chloroflexi_51_9_curated (100%)
1 1080 bp 56.11 3.89 100.00
Ig7659_scaffold_15739
Species: GWB2_Chloroflexi_54_36_curated (100%)
2 1080 bp 56.11 3.19 101.67
Ig7659_scaffold_15720
Species: RBG_16_Chloroflexi_60_22_curated (100%)
1 1081 bp 53.01 3.05 92.97
Displaying items 1-50 of 430 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.