ggKbase home page

Ig3397_v2_scaffold_2291_11

Organism: BJP_Ig3397_Hor_194_2013_Burkholderiales_65_39

near complete RP 50 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 6193..6495

Top 3 Functional Annotations

Value Algorithm Source
RNP-1-like RNA-binding protein id=5083657 bin=GWF1_Burkholderiales_GWF1_66_17 species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 97.0
  • Coverage: 101.0
  • Bit_score: 197
  • Evalue 5.50e-48
RNP-1 like RNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 74.7
  • Coverage: 91.0
  • Bit_score: 139
  • Evalue 4.30e-31
Tax=BJP_08E140C01_Burkholderiales_65_30 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 101.0
  • Bit_score: 203
  • Evalue 1.40e-49

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

BJP_08E140C01_Burkholderiales_65_30 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 303
ATGAGCACCAAACTTTACGTGGGCAACCTGCCTTATTCCATCGACGACGCCATCCTGCGCAACAACTTCACCGAGTTTGGCGGCGTGACGTCGGCCAAGGTCATGATGGACCGCGACACCGGTCGCTCCAAAGGCTTCGGCTTTGTGGAAATGTCCACCGCCGAACAGGCCGAGGCCGCGATCCAGAGCCTCAACGGCATGTCGGTTGACGGCCGCTCGATCGTGGTGAACATCTCGCGCCCGAAAGAGCCGGGCACCGGCGGCTACGGCGGTGGCGACCGCGGTCGGCGTGGCGGCTACTGA
PROTEIN sequence
Length: 101
MSTKLYVGNLPYSIDDAILRNNFTEFGGVTSAKVMMDRDTGRSKGFGFVEMSTAEQAEAAIQSLNGMSVDGRSIVVNISRPKEPGTGGYGGGDRGRRGGY*