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Ig3397_v2_scaffold_800_4

Organism: BJP_Ig3397_Hor_194_2013_Spirochaetes_44_7

near complete RP 50 / 55 MC: 4 BSCG 49 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(3351..4160)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A (EC:4.2.1.70); K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] similarity KEGG
DB: KEGG
  • Identity: 43.9
  • Coverage: 246.0
  • Bit_score: 201
  • Evalue 3.20e-49
tRNA pseudouridine synthase id=3960213 bin=GWB1_CP_36_13 species=Brachyspira pilosicoli genus=Brachyspira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 similarity UNIREF
DB: UNIREF100
  • Identity: 52.4
  • Coverage: 246.0
  • Bit_score: 267
  • Evalue 1.50e-68
Tax=GWB1_Spirochaetes_36_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 52.4
  • Coverage: 246.0
  • Bit_score: 267
  • Evalue 2.10e-68

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Taxonomy

GWB1_Spirochaetes_36_13_curated → Spirochaetes → Bacteria

Sequences

DNA sequence
Length: 810
ATGAGCCAGAAAGTCATCCGCATCGACTTTGCCTATGATGGTACCCGCTATAAAGGGTATCAAATTCAAAAAAATGATCCAACCATCCAAGGAGAGCTGGAAAAAGCCCTGGAAAAAATCTACAAAACACCGGTCACGACTTTTGCGGCAGGACGCACCGATACCGGCGTCCATGCGGTGCACCAGGTCGCCAGCTATAAAACTGCCAGCCCTATTCCTTTACTGGGCGTCAAAAAAGCCCTGCGCTCCCTCTTACCCCAAGATATTTTCGTCTATGAAGTTAGCGAGGCCGAAGCGACCTTCCACGCCCGCTTTTCTCCTTTAAAACGCAGTTATCTCTACGTGATTTTTAATGGCGCGGAGCCCTCGCCTTTTTCCCGTCTTTACAGCTGGTGGGTGCCTCGAAAACTCTCACTTTTTAAGCTTCGCCGCACCCTTAAAATCCTCAAGGGCGAGCATGACTTTTCTTCCTTTACCCAAAGAAGTGAAAAAGAAAACCATATTCGCACCCTCTATAAAATCAAGGTGAAAAAACGAAAACAGTTTATTTTTATTCTGATCCAGGGCAATAGCTTTTTACGCAGGATGATCCGTCTTTTAGTGGGCACAGCGGTAGGCATCACTGAGTGCAAAACCCTTAAACCCTCCGCCCTGAAAACTATACTGGAACTCAAAAATCGGGGAGAAAACCCTTTTACGGCAGCCCCCGGAGGGGGATTGTTTTTTTATCGTGTGCATTTCAAAGGCAAAGACTTTCTGGACACACGGGGATGGGGAAAAGGGAATGTAGGTCCCTTCAAGGTGAACTAA
PROTEIN sequence
Length: 270
MSQKVIRIDFAYDGTRYKGYQIQKNDPTIQGELEKALEKIYKTPVTTFAAGRTDTGVHAVHQVASYKTASPIPLLGVKKALRSLLPQDIFVYEVSEAEATFHARFSPLKRSYLYVIFNGAEPSPFSRLYSWWVPRKLSLFKLRRTLKILKGEHDFSSFTQRSEKENHIRTLYKIKVKKRKQFIFILIQGNSFLRRMIRLLVGTAVGITECKTLKPSALKTILELKNRGENPFTAAPGGGLFFYRVHFKGKDFLDTRGWGKGNVGPFKVN*