ggKbase home page

Ig3397_v2_scaffold_1910_7

Organism: BJP_Ig3397_Hor_194_2013_Spirochaetes_44_7

near complete RP 50 / 55 MC: 4 BSCG 49 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 7117..7686

Top 3 Functional Annotations

Value Algorithm Source
TrkA-N domain protein id=2957293 bin=GWB1_CP_36_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 similarity UNIREF
DB: UNIREF100
  • Identity: 64.0
  • Coverage: 175.0
  • Bit_score: 225
  • Evalue 4.60e-56
TrkA-N domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 41.9
  • Coverage: 172.0
  • Bit_score: 143
  • Evalue 7.20e-32
Tax=GWB1_Spirochaetes_36_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 64.0
  • Coverage: 175.0
  • Bit_score: 225
  • Evalue 6.50e-56

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWB1_Spirochaetes_36_13_curated → Spirochaetes → Bacteria

Sequences

DNA sequence
Length: 570
ATGTATGCCAAGCGGATTATTGGTATTATTATTTTTATTCTGGCTATGATATTGCTGGGCACCTTGGGTTTTATGCTTATTGAAGGCTGGAATTTTCTGGATTCCATTTATATGACCATTATCATCCTCACTACGATTGGTTTTCAGGAAGTGCATCCCCTAAGCGGAAGCGGCAAAGTATTCACCATGATTTTTTCTCTGATAGGATTTTCTATTTTAGCGGGGTCCATCAGTATTTTAAGTTCCGCTATCATTGAAGGTAAAGTGATCAATATTTACAGGAGGAAGCGGATGCAAAAGCGTATCTCCAAGCTGAAAAAACACACTATCATCTGTGGGGCAGGGCATATTGGCAAGCATGTGATCCGGGAAATTATCAATTTGAAAGAAGAATTTGTCGTGATTGACTATGCAGGTGAACTGCTCCAGCAAATTCAATCGGAGCTGGAGGCCAATTCGAAATCTAACGAATTCCTCTATCTGGAAGGGGATGCGGGGCGGGAAGAGGTTCTTTTGCAGGCGGGCNNNNNNNNNNNNNNNNNNNNNNNNGCAGGCCGCGGGGTTGATTAG
PROTEIN sequence
Length: 190
MYAKRIIGIIIFILAMILLGTLGFMLIEGWNFLDSIYMTIIILTTIGFQEVHPLSGSGKVFTMIFSLIGFSILAGSISILSSAIIEGKVINIYRRKRMQKRISKLKKHTIICGAGHIGKHVIREIINLKEEFVVIDYAGELLQQIQSELEANSKSNEFLYLEGDAGREEVLLQAGXXXXXXXXAGRGVD*