ggKbase home page

Ig3397_v2_scaffold_2238_4

Organism: BJP_Ig3397_Hor_194_2013_Spirochaetes_44_7

near complete RP 50 / 55 MC: 4 BSCG 49 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 3183..3611

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L13 n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8D0U3_HALOH similarity UNIREF
DB: UNIREF100
  • Identity: 54.2
  • Coverage: 142.0
  • Bit_score: 169
  • Evalue 2.30e-39
rplM; 50S ribosomal protein L13 similarity KEGG
DB: KEGG
  • Identity: 54.2
  • Coverage: 142.0
  • Bit_score: 169
  • Evalue 7.10e-40
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=373903 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halothermothrix.;" source="Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.2
  • Coverage: 142.0
  • Bit_score: 169
  • Evalue 3.20e-39

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halothermothrix orenii → Halothermothrix → Halanaerobiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 429
ATGAATACATTCATGCAGAAAAAAGAAGAGCAGGAAATTAAATGGTTCATGATTGACGCAACAGATAAAGTGTTGGGCAGAATCGCGACCAAAGCCGCTTCCATTTTGCGCGGCAAAGAACTAGTAACCTATACTCCCCACGTAGACGGTGGAGCGGGAGTTATTATTATCAACGCCGATAAAGCGGTATTGACAGGCAATAAGGTTGAGAGCAAGACTTATCACTGGCACTCCGGATTTCCAGGGGGCATGAAATATAGAAGCTACACAGAGCTTATGGCATACAAACCAGAAATGCCTTTAACCAGAGCCATAAAAGGAATGATGCCCAAGAATAAGATGAGAAAAGTTTTGTTGGGCAGACTGAAAGTATATGCCGGGGAAGCTCATCCACACTCGGCCCAAAAACCCGAAACCGTACAATTTTAA
PROTEIN sequence
Length: 143
MNTFMQKKEEQEIKWFMIDATDKVLGRIATKAASILRGKELVTYTPHVDGGAGVIIINADKAVLTGNKVESKTYHWHSGFPGGMKYRSYTELMAYKPEMPLTRAIKGMMPKNKMRKVLLGRLKVYAGEAHPHSAQKPETVQF*