ggKbase home page

Ig3397_v2_scaffold_5118_3

Organism: BJP_Ig3397_Hor_194_2013_Spirochaetes_44_7

near complete RP 50 / 55 MC: 4 BSCG 49 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(2250..3695)

Top 3 Functional Annotations

Value Algorithm Source
Putative outer membrane component of multidrug efflux id=2476906 bin=GWF1_Spirochaetes_51_8 species=Brachyspira pilosicoli genus=Brachyspira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_51_8 organism_group=Spirochaetes organism_desc=Novel clade similarity UNIREF
DB: UNIREF100
  • Identity: 23.3
  • Coverage: 514.0
  • Bit_score: 122
  • Evalue 1.10e-24
Tax=GWF1_Spirochaetes_51_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 23.3
  • Coverage: 514.0
  • Bit_score: 122
  • Evalue 1.50e-24

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWF1_Spirochaetes_51_8_curated → Spirochaetes → Bacteria

Sequences

DNA sequence
Length: 1446
ATGCGCAGTAAACTTTGGCTCATCCTGCTCTCTCTTGCTTTGGCCCAATACTCACTCTCAGAGCCCCTGGGAGATAAAGTGCTCACCCCCGAGGATTTTGTGCGCCGGGCCATCGCCCATCATCCGGGAGTGCAAAAATTATTCTATGAATACCGCGAAAAAACCAGCATCCAGAAACAGTCAGGCGCCCTTAAGGATTTCCTGCTCTCCTCCAAACTGGATTACACCTACACCGGCCCTCTTGATAAAAACGGCGTTTTAACCGGTGAAAAAAGCGATTCTCTGGGTTTTGCCGCCACCCTATCCAAAAAATTTCCTTCTCTTCTGGGTATGAATGCTTCCCTTTCAGCCGGCTATAGCAGTGTTTCCGGACAAAACTACACCTCGGGTCAGGAGATCCGTCAGTACCAGCCTACCTTGGGAGCGGCCATTACCCTTCCCCTCTTGAAAAATTTCCTGGGACTGTTGGACCTGAACACCCTCAAAAACATGGAACAAGGCCTCCAGATGCTCAAATACTCCCAGGAAGAGGCCCTAGAACTCTGGCTTTCGGGTCTTTACGCCACTTACCAGGAATGGGCCCTCGCTTATCAAAAAGTAAAGCTGTACAATGAAATCAAAGATCGCTCCGCCTTGATCCTGGCCCAGACCCAACGCAAGTCTCGATACAAAATCGCCGATGAAAGTGACTTGGTGCTCGCCCGGGAAAATTTCCTTAAATACCAGTCCCTCGTTTTAGGAGCCATAAAGGATGAACAAAAACAGTATCTTTATATCCTTTCTTACCTGGGGCAAACCAAACCCGAGTCCCGCTACGAACCGCTTTGGGATACCAAAGGAACTCAAATCCCCGTTCCCAATCCACCGGGCCCGGAAAGCCTTCGCATCATTCGCCTGGCCAAACTCCAGCTGGAATACCAAAATACCCGCTTAGCGTCCGCCACCAGTGATTTGAAGCCCTCTCTTGACCTAGAGCTTCAGTACCGCCAAAACGGCGGCGGGGACAACGGCGGGGATTCTTTTAAGTACCTCAACCAAAATGAGTTCTATGTGGGTTTCTTGTTTTCCATGCCCTTGGAAAACACCGATAAAAAGAATGCTCACCGGGCCTCAGTAGCCGCCTTGGGGAAGGTGCAAAAGGAATATGAGGAGCTGGCCCTCGCTGTTTCCACGGAACTGTCACAAATCGCTGATGAGCTAAAAAGCCAGAGCGCAATCCTGAAACTCAACGAAGAACGGGTCAAGCTTTCCGCTTACCGGGTTGAGCTCATGACCGGCCGTTATGGCCAAAGCCGAGTAACCCTAAAAGAGCTCACAGATGTGAGAGACACCTATGCCTCCACATTGATGAGCTATCTGGAAGAACAAAACACCTACCAGAAAAAACTGCTCGAATACAAAACCCTCTCAGACCAGCTGGATTTATCGGTGCTGGGCCCGGAGTAA
PROTEIN sequence
Length: 482
MRSKLWLILLSLALAQYSLSEPLGDKVLTPEDFVRRAIAHHPGVQKLFYEYREKTSIQKQSGALKDFLLSSKLDYTYTGPLDKNGVLTGEKSDSLGFAATLSKKFPSLLGMNASLSAGYSSVSGQNYTSGQEIRQYQPTLGAAITLPLLKNFLGLLDLNTLKNMEQGLQMLKYSQEEALELWLSGLYATYQEWALAYQKVKLYNEIKDRSALILAQTQRKSRYKIADESDLVLARENFLKYQSLVLGAIKDEQKQYLYILSYLGQTKPESRYEPLWDTKGTQIPVPNPPGPESLRIIRLAKLQLEYQNTRLASATSDLKPSLDLELQYRQNGGGDNGGDSFKYLNQNEFYVGFLFSMPLENTDKKNAHRASVAALGKVQKEYEELALAVSTELSQIADELKSQSAILKLNEERVKLSAYRVELMTGRYGQSRVTLKELTDVRDTYASTLMSYLEEQNTYQKKLLEYKTLSDQLDLSVLGPE*