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Ig3397_v2_scaffold_6544_3

Organism: BJP_Ig3397_Hor_194_2013_Spirochaetes_44_7

near complete RP 50 / 55 MC: 4 BSCG 49 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 2091..2666

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily id=4106493 bin=GWB1_CP_36_13 species=Clostridium thermocellum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 similarity UNIREF
DB: UNIREF100
  • Identity: 40.5
  • Coverage: 190.0
  • Bit_score: 130
  • Evalue 1.60e-27
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 33.3
  • Coverage: 174.0
  • Bit_score: 92
  • Evalue 1.90e-16
Tax=GWB1_Spirochaetes_36_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 40.9
  • Coverage: 186.0
  • Bit_score: 130
  • Evalue 2.90e-27

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Taxonomy

GWB1_Spirochaetes_36_13_curated → Spirochaetes → Bacteria

Sequences

DNA sequence
Length: 576
TTGGAAGAAACAGAGCTTAAACAACTCATAGACAATGTAAAAAACGGCAAAATCCAGGATTTTGAAAAAATCATAAAACAATATGAAAAACTGGTTTTTAAAATTCTTCATCTGAAACTGCCTGCCCATTTGCTCTCCTCTCTGGAAGATTTGGCTCAGGAAGTATTCTTAACCCTTTTTGACAAAATTTCCTCCTACAAACCCGCCTATTCTTTTACCAATTGGCTTTATACCATTACTCTCAATAAAGTGCGTAATTTTGTAAAACAAGAAAGCCGAAGGGAACACCGGGCCCTGGATGAGTCACACCAGGCACCCGAGAAAAGCCATACCAACACCATTATTGAAGGACAAGAGGCCCTCAAGCAAGCCATCGGGGAGCTACCCGAAAAATACCAGCAAGTCTTATTTCTGTACTACAGCGAATCAATGAAAATTAACGAAATAGCCGATAACCTGGACATTTCTTTGAACACTGTCAAGACCTGGTTAAAAAGAGCCAAGGACAAACTTGCGAAAAATACTCAGTTGAAAAATATTTTTGAAACTTTTTTTGAAGAAAGTGGTAAAGTGTAG
PROTEIN sequence
Length: 192
LEETELKQLIDNVKNGKIQDFEKIIKQYEKLVFKILHLKLPAHLLSSLEDLAQEVFLTLFDKISSYKPAYSFTNWLYTITLNKVRNFVKQESRREHRALDESHQAPEKSHTNTIIEGQEALKQAIGELPEKYQQVLFLYYSESMKINEIADNLDISLNTVKTWLKRAKDKLAKNTQLKNIFETFFEESGKV*