ggKbase home page

Ig3397_v2_scaffold_8629_5

Organism: BJP_Ig3397_Hor_194_2013_Spirochaetes_44_7

near complete RP 50 / 55 MC: 4 BSCG 49 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 3289..3987

Top 3 Functional Annotations

Value Algorithm Source
pseudouridine synthase; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] similarity KEGG
DB: KEGG
  • Identity: 45.1
  • Coverage: 226.0
  • Bit_score: 183
  • Evalue 7.70e-44
Pseudouridine synthase id=3713954 bin=GWB1_CP_36_13 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 similarity UNIREF
DB: UNIREF100
  • Identity: 55.2
  • Coverage: 230.0
  • Bit_score: 262
  • Evalue 4.20e-67
Tax=GWB1_Spirochaetes_36_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 54.8
  • Coverage: 230.0
  • Bit_score: 260
  • Evalue 1.70e-66

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWB1_Spirochaetes_36_13_curated → Spirochaetes → Bacteria

Sequences

DNA sequence
Length: 699
ATGCGTTTAAACCGTTATTTGGCCCTCTGCGGGGTTGCCTCCCGGCGAAAATGCGATGCCTTGATCGAGGAAGGCAAGGTGACCATCAACGGCAAACCGGCGGTGGTAGGCACCGTGGTCAATGCCCGGGTAGACGAGGTTAGGGTGGCCGACAAACTGGTCGTGGCCAAAAATAAAGTTTTTTTTGTCATGTACAAGCCTCTCCACGTCCTGACTACTCTTTCTGACCCCCGGGAACGCCCCACTATCGCTGATTATCTCTCTCATATCCCCTACCGTATTTTCCCCGTAGGCAGACTGGATTTTGACTCCGAGGGCCTGCTTTTGATGACCAATGATGGAGCCTTGGCCCACCGGGTACAGCACCCCAAGTACAAGCTGGAGAAAGAATATAAAGTTACTTTATCCCGGGAACTTACCCCCGCTGAGCACAAAAAGTTTGAGGAAGGCATAACCCTGGATGAAGGCACCACGGCCCCGACCCAGCTTTTGCGCCTGGATGAGAAAACCTATCGGGTTATCCTGACCCAAGGCTGGCACCGGCAAATTCGGCGCATGTTTGAGACCTTTGAGATCGAGGTTACCCGCCTTTTACGCACCCGCATCGGAAATATTCCCTTGGGCCCCATTCGACCTGGAGAAATCCGGGAACTGGAACCGGCGTTGCTGGCTGACCTGCGAAAAACTCTTAATTTTTAA
PROTEIN sequence
Length: 233
MRLNRYLALCGVASRRKCDALIEEGKVTINGKPAVVGTVVNARVDEVRVADKLVVAKNKVFFVMYKPLHVLTTLSDPRERPTIADYLSHIPYRIFPVGRLDFDSEGLLLMTNDGALAHRVQHPKYKLEKEYKVTLSRELTPAEHKKFEEGITLDEGTTAPTQLLRLDEKTYRVILTQGWHRQIRRMFETFEIEVTRLLRTRIGNIPLGPIRPGEIRELEPALLADLRKTLNF*