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BJP_IG2102_Hor_167_2014_GWC2_Spirochaete_51_5

BJP_IG2102_Spirochaetes_51_5
In projects: 08E140C01_zone5_2014  |  horonobe_genomes

Consensus taxonomy: Spirochaetes  →  Bacteria

Description

Moderate, probably partial

Displaying items 51-100 of 1040 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
bjp_ig2102_scaffold_6073
Species: GWC2_Spirochaetes_52_13_curated (66.67%)
6 5510 bp 45.61 5.29 98.22
bjp_ig2102_scaffold_5292
Phylum: Spirochaetes (66.67%)
6 6270 bp 51.64 4.94 93.92
bjp_ig2102_scaffold_7998
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
6 4308 bp 49.49 4.45 72.21
bjp_ig2102_scaffold_21508
Species: GWC2_Spirochaetes_52_13_curated (60%)
5 1877 bp 48.43 4.59 98.14
bjp_ig2102_scaffold_8398
Species: GWC2_Spirochaetes_52_13_curated (60%)
5 4118 bp 56.29 5.76 95.73
bjp_ig2102_scaffold_10962
Order: Spirochaetales (60%)
5 3292 bp 52.04 4.17 87.85
bjp_ig2102_scaffold_6390
Species: Sphaerochaeta pleomorpha (60%)
5 5260 bp 52.30 4.82 86.18
bjp_ig2102_scaffold_6913
Species: GWC2_Spirochaetes_52_13_curated (80%)
5 4893 bp 48.78 5.89 92.70
bjp_ig2102_scaffold_5360
Order: Spirochaetales (60%)
5 6177 bp 54.74 4.99 98.69
bjp_ig2102_scaffold_5892
Species: BJP_08E140C01_Spirochaeta_53_29 (80%)
5 5665 bp 47.94 5.12 90.77
bjp_ig2102_scaffold_7317
Species: BJP_08E140C01_Spirochaeta_53_29 (60%)
5 4672 bp 54.28 4.56 86.56
bjp_ig2102_scaffold_11551
Species: GWC2_Spirochaetes_52_13_curated (60%)
5 3153 bp 53.44 4.17 101.24
bjp_ig2102_scaffold_7319
Species: GWC2_Spirochaetes_52_13_curated (80%)
5 4672 bp 54.24 4.27 93.69
bjp_ig2102_scaffold_8713
Species: GWC2_Spirochaetes_52_13_curated (60%)
5 3987 bp 46.07 4.85 93.91
bjp_ig2102_scaffold_9273
Species: BJP_08E140C01_Spirochaeta_53_29 (80%)
5 3786 bp 43.79 5.03 93.50
bjp_ig2102_scaffold_6180
Phylum: Spirochaetes (60%)
5 5428 bp 53.21 4.76 89.65
bjp_ig2102_scaffold_5909
Species: BJP_08E140C01_Spirochaeta_53_29 (80%)
5 5648 bp 43.59 4.87 98.16
bjp_ig2102_scaffold_9542
Species: BJP_08E140C01_Spirochaeta_53_29 (60%)
5 3698 bp 50.70 4.70 100.11
bjp_ig2102_scaffold_15418
Order: Spirochaetales (60%)
5 2484 bp 51.93 4.44 88.53
bjp_ig2102_scaffold_9037
Species: Sphaerochaeta coccoides (100%)
5 3866 bp 52.77 3.94 99.72
bjp_ig2102_scaffold_11829
Species: GWC2_Spirochaetes_52_13_curated (60%)
5 3094 bp 48.32 4.98 95.99
bjp_ig2102_scaffold_10020
Species: Sphaerochaeta pleomorpha (60%)
5 3546 bp 50.87 4.43 90.27
bjp_ig2102_scaffold_10791
Species: BJP_IG2157_Clostridiales_52_13 (60%)
5 3333 bp 53.95 4.94 86.77
bjp_ig2102_scaffold_6727
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
5 5015 bp 52.14 4.70 95.53
bjp_ig2102_scaffold_7103
Species: GWC2_Spirochaetes_52_13_curated (60%)
5 4786 bp 52.26 5.08 92.52
bjp_ig2102_scaffold_12176
Species: Sphaerochaeta coccoides (80%)
5 3014 bp 50.56 5.36 100.83
bjp_ig2102_scaffold_9315
Species: BJP_08E140C01_Spirochaeta_53_29 (60%)
5 3771 bp 50.46 5.25 88.78
bjp_ig2102_scaffold_7364
Phylum: Spirochaetes (80%)
5 4639 bp 50.77 5.18 86.33
bjp_ig2102_scaffold_10807
Order: Spirochaetales (60%)
5 3330 bp 50.72 4.81 81.80
bjp_ig2102_scaffold_10304
Species: BJP_08E140C01_Spirochaeta_53_29 (60%)
5 3466 bp 43.71 5.01 86.47
bjp_ig2102_scaffold_9336
Species: Sphaerochaeta coccoides (60%)
5 3765 bp 51.45 4.09 100.48
bjp_ig2102_scaffold_8783
Order: Spirochaetales (60%)
5 3957 bp 49.81 4.27 91.74
bjp_ig2102_scaffold_18545
Species: BJP_08E140C01_Spirochaeta_53_29 (60%)
5 2125 bp 51.53 4.90 97.55
bjp_ig2102_scaffold_7139
Species: BJP_08E140C01_Spirochaeta_53_29 (60%)
5 4765 bp 53.60 4.34 98.53
bjp_ig2102_scaffold_7654
Order: Spirochaetales (60%)
5 4487 bp 52.71 4.95 86.12
bjp_ig2102_scaffold_8537
Species: GWC2_Spirochaetes_52_13_curated (60%)
5 4061 bp 50.95 4.35 97.00
bjp_ig2102_scaffold_9099
Species: BJP_08E140C01_Spirochaeta_53_29 (60%)
5 3845 bp 53.81 4.32 74.04
bjp_ig2102_scaffold_8545
Phylum: Spirochaetes (80%)
5 4059 bp 53.14 5.43 85.88
bjp_ig2102_scaffold_10340
Order: Spirochaetales (80%)
5 3457 bp 55.11 4.72 97.71
bjp_ig2102_scaffold_9370
Species: BJP_08E140C01_Spirochaeta_53_29 (80%)
5 3755 bp 53.61 4.99 96.19
bjp_ig2102_scaffold_6536
Genus: Sphaerochaeta (60%)
5 5156 bp 55.59 4.13 89.37
bjp_ig2102_scaffold_11661
Phylum: Spirochaetes (60%)
5 3130 bp 49.30 5.07 88.08
bjp_ig2102_scaffold_11152
Species: GWC2_Spirochaetes_52_13_curated (60%)
5 3244 bp 51.17 4.89 81.84
bjp_ig2102_scaffold_10112
Order: Spirochaetales (80%)
5 3519 bp 50.98 4.59 83.21
bjp_ig2102_scaffold_10116
Species: GWC2_Spirochaetes_52_13_curated (80%)
5 3519 bp 51.21 4.42 92.50
bjp_ig2102_scaffold_14576
Species: GWC2_Spirochaetes_52_13_curated (60%)
5 3768 bp 53.34 4.21 83.36
bjp_ig2102_scaffold_11428
Species: GWC2_Spirochaetes_52_13_curated (60%)
5 3185 bp 50.39 4.88 91.37
bjp_ig2102_scaffold_13650
Species: BJP_08E140C01_Spirochaeta_53_29 (60%)
5 2744 bp 46.90 5.12 82.65
bjp_ig2102_scaffold_8085
Phylum: Spirochaetes (60%)
5 4268 bp 49.20 4.53 89.83
bjp_ig2102_scaffold_6320
Species: GWB1_Spirochaetes_59_5_curated (60%)
5 5319 bp 51.38 5.11 95.94
Displaying items 51-100 of 1040 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.