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BJP_IG2102_Hor_167_2014_GWC2_Spirochaete_51_5

BJP_IG2102_Spirochaetes_51_5
In projects: 08E140C01_zone5_2014  |  horonobe_genomes

Consensus taxonomy: Spirochaetes  →  Bacteria

Description

Moderate, probably partial

Displaying items 301-350 of 1040 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
bjp_ig2102_scaffold_22267
Species: GWC2_Spirochaetes_52_13_curated (100%)
3 1826 bp 49.18 4.38 72.95
bjp_ig2102_scaffold_14995
Phylum: Spirochaetes (66.67%)
3 2543 bp 54.19 4.69 85.88
bjp_ig2102_scaffold_39867
Order: Spirochaetales (66.67%)
3 1121 bp 49.60 3.37 90.99
bjp_ig2102_scaffold_11589
Species: Sphaerochaeta pleomorpha (100%)
3 3147 bp 52.30 4.56 97.43
bjp_ig2102_scaffold_19045
Species: GWC2_Spirochaetes_52_13_curated (66.67%)
3 2078 bp 52.07 3.92 99.18
bjp_ig2102_scaffold_13806
Species: GWC2_Spirochaetes_52_13_curated (100%)
3 2717 bp 52.59 3.95 96.39
bjp_ig2102_scaffold_27927
Species: BJP_08E140C01_Spirochaeta_53_29 (66.67%)
3 1511 bp 50.23 4.80 94.11
bjp_ig2102_scaffold_41073
Species: GWC2_Spirochaetes_52_13_curated (100%)
3 1093 bp 51.51 4.42 92.77
bjp_ig2102_scaffold_11338
Species: GWC2_Spirochaetes_52_13_curated (66.67%)
3 3203 bp 56.85 4.05 89.17
bjp_ig2102_scaffold_28482
Species: GWC2_Spirochaetes_52_13_curated (100%)
3 1489 bp 47.35 5.88 84.02
bjp_ig2102_scaffold_29594
Species: GWC2_Spirochaetes_52_13_curated (100%)
3 1441 bp 52.95 4.61 91.60
bjp_ig2102_scaffold_20461
Species: BJP_08E140C01_Spirochaeta_53_29 (66.67%)
3 1958 bp 49.28 4.55 81.97
bjp_ig2102_scaffold_16885
Species: BJP_08E140C01_Spirochaeta_53_29 (66.67%)
3 2302 bp 54.87 5.44 94.35
bjp_ig2102_scaffold_36645
Phylum: Spirochaetes (66.67%)
3 1204 bp 48.42 4.14 94.44
bjp_ig2102_scaffold_41083
Phylum: Spirochaetes (66.67%)
3 1093 bp 49.31 4.28 88.11
bjp_ig2102_scaffold_23387
Species: GWC2_Spirochaetes_52_13_curated (100%)
3 1755 bp 53.96 3.53 94.36
bjp_ig2102_scaffold_29603
Species: BJP_IG2103_Clostridiales_50_15 (100%)
3 1441 bp 49.55 3.46 100.14
bjp_ig2102_scaffold_12702
Species: Sphaerochaeta pleomorpha (66.67%)
3 2909 bp 51.43 4.41 73.94
bjp_ig2102_scaffold_16894
Species: GWC2_Spirochaetes_52_13_curated (100%)
3 2300 bp 50.13 4.73 90.65
bjp_ig2102_scaffold_30230
Genus: Brachyspira (66.67%)
3 1416 bp 53.60 4.59 93.01
bjp_ig2102_scaffold_32071
Species: BJP_08E140C01_Spirochaeta_53_29 (66.67%)
3 1349 bp 51.59 3.36 88.07
bjp_ig2102_scaffold_27944
Species: BJP_08E140C01_Spirochaeta_53_29 (66.67%)
3 1510 bp 52.05 4.30 101.13
bjp_ig2102_scaffold_15713
Order: Spirochaetales (66.67%)
3 2444 bp 55.40 4.57 95.01
bjp_ig2102_scaffold_23905
Order: Spirochaetales (66.67%)
3 1722 bp 48.26 4.30 84.84
bjp_ig2102_scaffold_27690
Species: GWC2_Spirochaetes_52_13_curated (100%)
3 1523 bp 53.05 5.16 95.93
bjp_ig2102_scaffold_43562
Species: GWC2_Spirochaetes_52_13_curated (100%)
3 1038 bp 50.96 4.22 81.79
bjp_ig2102_scaffold_24365
Species: BJP_08E140C01_Spirochaeta_53_29 (66.67%)
3 1694 bp 56.79 4.28 98.47
bjp_ig2102_scaffold_14766
Phylum: Spirochaetes (66.67%)
3 2573 bp 50.41 4.99 84.88
bjp_ig2102_scaffold_28503
Species: BJP_08E140C01_Spirochaeta_53_29 (66.67%)
3 1488 bp 55.38 5.18 92.34
bjp_ig2102_scaffold_16647
Genus: Spirochaeta (66.67%)
3 2328 bp 53.69 3.70 73.58
bjp_ig2102_scaffold_12456
Species: GWC2_Spirochaetes_52_13_curated (100%)
3 2952 bp 53.59 5.93 95.73
bjp_ig2102_scaffold_38176
Species: GWC2_Spirochaetes_52_13_curated (100%)
3 1163 bp 52.97 4.02 70.94
bjp_ig2102_scaffold_15465
Order: Spirochaetales (66.67%)
3 2478 bp 48.55 4.39 91.40
bjp_ig2102_scaffold_9850
Order: Spirochaetales (66.67%)
3 3603 bp 53.59 4.61 94.42
bjp_ig2102_scaffold_22554
Species: GWC2_Spirochaetes_52_13_curated (100%)
3 1809 bp 51.41 3.51 98.34
bjp_ig2102_scaffold_12205
Species: GWC2_Spirochaetes_52_13_curated (66.67%)
3 3007 bp 47.89 4.07 99.67
bjp_ig2102_scaffold_14262
Species: GWC2_Spirochaetes_52_13_curated (66.67%)
3 2647 bp 51.79 5.70 93.05
bjp_ig2102_scaffold_19079
Species: GWC2_Spirochaetes_52_13_curated (100%)
3 2075 bp 52.77 5.24 98.17
bjp_ig2102_scaffold_14520
Species: GWC2_Spirochaetes_52_13_curated (66.67%)
3 2612 bp 52.22 4.74 95.10
bjp_ig2102_scaffold_19592
Species: GWC2_Spirochaetes_52_13_curated (66.67%)
3 2030 bp 52.76 4.09 95.62
bjp_ig2102_scaffold_12209
Order: Spirochaetales (66.67%)
3 3007 bp 48.22 4.22 75.12
bjp_ig2102_scaffold_14522
Order: Spirochaetales (66.67%)
3 2611 bp 53.31 5.73 91.11
bjp_ig2102_scaffold_44693
Species: GWC2_Spirochaetes_52_13_curated (100%)
3 1015 bp 52.22 4.17 91.92
bjp_ig2102_scaffold_13589
Species: BJP_08E140C01_Spirochaeta_53_29 (66.67%)
3 2752 bp 55.05 4.12 96.48
bjp_ig2102_scaffold_31045
Species: GWC2_Spirochaetes_52_13_curated (66.67%)
3 1386 bp 53.46 5.23 98.92
bjp_ig2102_scaffold_25358
Species: GWC2_Spirochaetes_52_13_curated (66.67%)
3 1639 bp 52.84 5.80 86.76
bjp_ig2102_scaffold_10071
Species: BJP_08E140C01_Spirochaeta_53_29 (66.67%)
3 3531 bp 54.89 3.85 97.71
bjp_ig2102_scaffold_25359
Species: GWC2_Spirochaetes_52_13_curated (100%)
3 1639 bp 45.76 4.05 99.57
bjp_ig2102_scaffold_18039
Phylum: Spirochaetes (66.67%)
3 2175 bp 55.63 3.96 93.79
bjp_ig2102_scaffold_17961
Species: GWC2_Spirochaetes_52_13_curated (66.67%)
3 2183 bp 49.84 3.60 94.96
Displaying items 301-350 of 1040 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.