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BJP_IG2102_Hor_167_2014_GWC2_Spirochaete_51_5

BJP_IG2102_Spirochaetes_51_5
In projects: 08E140C01_zone5_2014  |  horonobe_genomes

Consensus taxonomy: Spirochaetes  →  Bacteria

Description

Moderate, probably partial

Displaying items 1-50 of 1040 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
bjp_ig2102_scaffold_32733
Species: GWC2_Spirochaetes_52_13_curated (66.67%)
3 1327 bp 49.51 6.71 85.46
bjp_ig2102_scaffold_33870
Species: BJP_08E140C01_Spirochaeta_53_29 (66.67%)
3 1286 bp 47.82 6.58 99.14
bjp_ig2102_scaffold_21854
Species: GWC2_Spirochaetes_52_13_curated (66.67%)
3 1854 bp 53.18 6.35 99.51
bjp_ig2102_scaffold_6312
Species: BJP_08E140C01_Spirochaeta_53_29 (57.14%)
7 5327 bp 48.53 6.32 60.99
bjp_ig2102_scaffold_28516
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
1 1487 bp 56.15 6.30 99.87
bjp_ig2102_scaffold_29940
Species: GWC2_Spirochaetes_52_13_curated (66.67%)
3 1428 bp 52.38 6.24 100.21
bjp_ig2102_scaffold_17768
Phylum: Spirochaetes (66.67%)
3 2205 bp 53.97 6.23 83.40
bjp_ig2102_scaffold_22729
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
2 1797 bp 53.98 6.22 94.49
bjp_ig2102_scaffold_1222
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
22 25037 bp 47.16 6.20 91.01
bjp_ig2102_scaffold_18581
Species: GWC2_Spirochaetes_52_13_curated (100%)
3 2122 bp 50.94 6.19 97.55
bjp_ig2102_scaffold_7837
Species: GWC2_Spirochaetes_52_13_curated (50%)
4 4389 bp 51.38 6.16 85.65
bjp_ig2102_scaffold_30742
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1398 bp 45.99 6.16 81.12
bjp_ig2102_scaffold_5372
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
6 6169 bp 52.36 6.07 85.69
bjp_ig2102_scaffold_32083
Species: GWC2_Spirochaetes_52_13_curated (50%)
2 1348 bp 52.97 6.05 95.47
bjp_ig2102_scaffold_33453
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 1300 bp 50.62 6.04 99.00
bjp_ig2102_scaffold_14703
Species: GWC2_Spirochaetes_52_13_curated (50%)
2 2582 bp 55.85 6.02 99.81
bjp_ig2102_scaffold_31245
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
2 1379 bp 45.32 6.02 87.89
bjp_ig2102_scaffold_29705
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 1437 bp 56.16 5.99 84.13
bjp_ig2102_scaffold_24800
Species: BJP_08E140C01_Spirochaeta_53_29 (66.67%)
3 1668 bp 47.60 5.97 97.84
bjp_ig2102_scaffold_17803
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
4 2201 bp 52.48 5.97 95.14
bjp_ig2102_scaffold_20596
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 1946 bp 46.35 5.97 78.62
bjp_ig2102_scaffold_12456
Species: GWC2_Spirochaetes_52_13_curated (100%)
3 2952 bp 53.59 5.93 95.73
bjp_ig2102_scaffold_5216
Phylum: Spirochaetes (50%)
6 6351 bp 45.28 5.92 75.91
bjp_ig2102_scaffold_29806
Species: GWC2_Spirochaetes_52_13_curated (50%)
2 1432 bp 43.09 5.91 46.72
bjp_ig2102_scaffold_23663
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1738 bp 48.85 5.91 100.98
bjp_ig2102_scaffold_41845
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1075 bp 47.63 5.90 101.86
bjp_ig2102_scaffold_38682
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 1151 bp 54.65 5.90 101.13
bjp_ig2102_scaffold_6913
Species: GWC2_Spirochaetes_52_13_curated (80%)
5 4893 bp 48.78 5.89 92.70
bjp_ig2102_scaffold_6204
Species: GWC2_Spirochaetes_52_13_curated (57.14%)
7 5412 bp 47.71 5.89 70.73
bjp_ig2102_scaffold_42845
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1052 bp 55.80 5.88 93.54
bjp_ig2102_scaffold_28482
Species: GWC2_Spirochaetes_52_13_curated (100%)
3 1489 bp 47.35 5.88 84.02
bjp_ig2102_scaffold_5985
Phylum: Spirochaetes (55.56%)
9 5583 bp 52.95 5.87 86.24
bjp_ig2102_scaffold_7658
Species: GWC2_Spirochaetes_52_13_curated (57.14%)
7 4485 bp 53.13 5.86 94.78
bjp_ig2102_scaffold_15841
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 2428 bp 46.62 5.85 80.68
bjp_ig2102_scaffold_16874
Species: GWC2_Spirochaetes_52_13_curated (66.67%)
3 2304 bp 49.35 5.83 92.45
bjp_ig2102_scaffold_33426
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1302 bp 50.08 5.80 75.58
bjp_ig2102_scaffold_25358
Species: GWC2_Spirochaetes_52_13_curated (66.67%)
3 1639 bp 52.84 5.80 86.76
bjp_ig2102_scaffold_25197
Species: GWC2_Spirochaetes_52_13_curated (66.67%)
3 1647 bp 53.01 5.78 83.79
bjp_ig2102_scaffold_8398
Species: GWC2_Spirochaetes_52_13_curated (60%)
5 4118 bp 56.29 5.76 95.73
bjp_ig2102_scaffold_9110
Species: BJP_08E140C01_Spirochaeta_53_29 (66.67%)
3 3839 bp 52.46 5.74 93.23
bjp_ig2102_scaffold_14522
Order: Spirochaetales (66.67%)
3 2611 bp 53.31 5.73 91.11
bjp_ig2102_scaffold_9166
Species: GWC2_Spirochaetes_52_13_curated (50%)
4 3821 bp 50.62 5.73 87.94
bjp_ig2102_scaffold_22212
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 1829 bp 46.47 5.70 56.10
bjp_ig2102_scaffold_14262
Species: GWC2_Spirochaetes_52_13_curated (66.67%)
3 2647 bp 51.79 5.70 93.05
bjp_ig2102_scaffold_35287
Species: GWC2_Spirochaetes_52_13_curated (50%)
2 1244 bp 49.60 5.70 86.82
bjp_ig2102_scaffold_25733
Species: BJP_08E140C01_Spirochaeta_53_29 (75%)
4 1618 bp 47.71 5.69 90.67
bjp_ig2102_scaffold_41240
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
1 1089 bp 52.43 5.69 98.07
bjp_ig2102_scaffold_4895
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
6 6796 bp 52.55 5.69 92.30
bjp_ig2102_scaffold_31920
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1354 bp 43.80 5.69 96.16
bjp_ig2102_scaffold_5065
Species: BJP_08E140C01_Spirochaeta_53_29 (66.67%)
6 6573 bp 50.48 5.67 92.56
Displaying items 1-50 of 1040 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.