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BJP_IG2102_Hor_167_2014_GWC2_Spirochaete_51_5

BJP_IG2102_Spirochaetes_51_5
In projects: 08E140C01_zone5_2014  |  horonobe_genomes

Consensus taxonomy: Spirochaetes  →  Bacteria

Description

Moderate, probably partial

Displaying items 51-100 of 1040 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
bjp_ig2102_scaffold_38629
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1152 bp 52.17 3.28 84.90
bjp_ig2102_scaffold_24956
Species: Sphaerochaeta pleomorpha (100%)
1 1659 bp 54.07 3.28 84.09
bjp_ig2102_scaffold_42648
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1057 bp 50.14 3.29 95.93
bjp_ig2102_scaffold_31333
Species: GWC2_Spirochaetes_52_13_curated (50%)
2 1376 bp 53.78 3.29 97.89
bjp_ig2102_scaffold_33832
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1287 bp 50.97 3.29 68.53
bjp_ig2102_scaffold_31578
Species: Spirochaeta smaragdinae (50%)
2 1367 bp 54.06 3.31 90.86
bjp_ig2102_scaffold_37458
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1182 bp 52.71 3.32 99.75
bjp_ig2102_scaffold_16709
Species: GWC2_Spirochaetes_52_13_curated (50%)
4 2322 bp 46.04 3.32 71.71
bjp_ig2102_scaffold_43499
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1039 bp 51.01 3.34 82.29
bjp_ig2102_scaffold_27456
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
2 1533 bp 55.06 3.35 98.43
bjp_ig2102_scaffold_25766
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 1616 bp 55.94 3.36 93.94
bjp_ig2102_scaffold_32071
Species: BJP_08E140C01_Spirochaeta_53_29 (66.67%)
3 1349 bp 51.59 3.36 88.07
bjp_ig2102_scaffold_27534
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1530 bp 45.10 3.36 100.00
bjp_ig2102_scaffold_18723
Species: GWC2_Spirochaetes_52_13_curated (100%)
3 2108 bp 45.92 3.37 99.62
bjp_ig2102_scaffold_39867
Order: Spirochaetales (66.67%)
3 1121 bp 49.60 3.37 90.99
bjp_ig2102_scaffold_22850
Species: Sphaerochaeta globosa (100%)
2 1790 bp 51.28 3.37 87.82
bjp_ig2102_scaffold_42087
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1069 bp 53.04 3.39 99.63
bjp_ig2102_scaffold_14428
Species: GWC2_Spirochaetes_52_13_curated (100%)
3 2625 bp 48.57 3.39 92.34
bjp_ig2102_scaffold_30025
Species: GWB1_Spirochaetes_59_5_curated (100%)
1 1425 bp 49.96 3.39 79.58
bjp_ig2102_scaffold_15428
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
4 2484 bp 51.33 3.40 81.04
bjp_ig2102_scaffold_18042
Order: Spirochaetales (50%)
4 2174 bp 50.55 3.40 99.91
bjp_ig2102_scaffold_22439
Species: Sphaerochaeta coccoides (100%)
2 1816 bp 55.84 3.41 100.11
bjp_ig2102_scaffold_33932
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 1284 bp 53.27 3.41 98.60
bjp_ig2102_scaffold_44541
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 1018 bp 46.76 3.41 101.08
bjp_ig2102_scaffold_29193
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1457 bp 50.03 3.42 89.57
bjp_ig2102_scaffold_37292
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 1187 bp 52.23 3.43 86.69
bjp_ig2102_scaffold_24693
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 1673 bp 49.85 3.43 93.25
bjp_ig2102_scaffold_34274
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1273 bp 50.59 3.44 81.30
bjp_ig2102_scaffold_41017
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1094 bp 53.93 3.45 99.54
bjp_ig2102_scaffold_31895
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1355 bp 51.88 3.45 85.02
bjp_ig2102_scaffold_29603
Species: BJP_IG2103_Clostridiales_50_15 (100%)
3 1441 bp 49.55 3.46 100.14
bjp_ig2102_scaffold_41131
Species: GWB1_Spirochaetes_59_5_curated (100%)
2 1092 bp 55.04 3.46 100.00
bjp_ig2102_scaffold_41138
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1092 bp 51.47 3.46 96.43
bjp_ig2102_scaffold_14182
Phylum: Spirochaetes (66.67%)
3 2657 bp 48.55 3.47 82.54
bjp_ig2102_scaffold_39343
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1133 bp 53.66 3.47 97.44
bjp_ig2102_scaffold_36161
Species: Sphaerochaeta globosa (50%)
2 1218 bp 56.90 3.47 99.75
bjp_ig2102_scaffold_37789
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1173 bp 54.48 3.48 100.77
bjp_ig2102_scaffold_28802
Species: BJP_08E140C01_Spirochaeta_53_29 (66.67%)
3 1475 bp 50.31 3.48 96.00
bjp_ig2102_scaffold_27800
Species: GWC2_Spirochaetes_52_13_curated (50%)
2 1518 bp 52.31 3.48 91.50
bjp_ig2102_scaffold_34827
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1255 bp 50.84 3.49 98.49
bjp_ig2102_scaffold_43706
Species: BJP_IG2103_Clostridiales_50_15 (100%)
2 1035 bp 53.82 3.50 98.26
bjp_ig2102_scaffold_41685
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
2 1079 bp 56.53 3.50 94.25
bjp_ig2102_scaffold_19202
Species: GWC2_Spirochaetes_52_13_curated (50%)
2 2064 bp 53.44 3.51 98.69
bjp_ig2102_scaffold_27120
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1550 bp 48.32 3.51 81.29
bjp_ig2102_scaffold_22554
Species: GWC2_Spirochaetes_52_13_curated (100%)
3 1809 bp 51.41 3.51 98.34
bjp_ig2102_scaffold_40052
Species: GWC2_Spirochaetes_52_13_curated (50%)
2 1117 bp 52.73 3.51 79.23
bjp_ig2102_scaffold_32652
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1329 bp 45.07 3.52 91.87
bjp_ig2102_scaffold_23387
Species: GWC2_Spirochaetes_52_13_curated (100%)
3 1755 bp 53.96 3.53 94.36
bjp_ig2102_scaffold_38551
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1154 bp 49.65 3.53 77.47
bjp_ig2102_scaffold_27307
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1541 bp 53.54 3.53 98.31
Displaying items 51-100 of 1040 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.