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BJP_IG2102_Hor_167_2014_GWC2_Spirochaete_51_5

BJP_IG2102_Spirochaetes_51_5
In projects: 08E140C01_zone5_2014  |  horonobe_genomes

Consensus taxonomy: Spirochaetes  →  Bacteria

Description

Moderate, probably partial

Displaying items 301-350 of 1040 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
bjp_ig2102_scaffold_6423
Species: GWC2_Spirochaetes_52_13_curated (50%)
6 5236 bp 47.50 5.19 98.26
bjp_ig2102_scaffold_43706
Species: BJP_IG2103_Clostridiales_50_15 (100%)
2 1035 bp 53.82 3.50 98.26
bjp_ig2102_scaffold_3426
Species: GWC2_Spirochaetes_52_13_curated (57.14%)
7 9675 bp 52.61 5.17 98.23
bjp_ig2102_scaffold_6073
Species: GWC2_Spirochaetes_52_13_curated (66.67%)
6 5510 bp 45.61 5.29 98.22
bjp_ig2102_scaffold_17386
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
3 2245 bp 52.96 3.97 98.22
bjp_ig2102_scaffold_40499
Species: GWC2_Spirochaetes_52_13_curated (50%)
2 1106 bp 51.36 5.46 98.19
bjp_ig2102_scaffold_19079
Species: GWC2_Spirochaetes_52_13_curated (100%)
3 2075 bp 52.77 5.24 98.17
bjp_ig2102_scaffold_36973
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1195 bp 47.87 5.31 98.16
bjp_ig2102_scaffold_5909
Species: BJP_08E140C01_Spirochaeta_53_29 (80%)
5 5648 bp 43.59 4.87 98.16
bjp_ig2102_scaffold_43925
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1030 bp 52.33 5.13 98.16
bjp_ig2102_scaffold_21508
Species: GWC2_Spirochaetes_52_13_curated (60%)
5 1877 bp 48.43 4.59 98.14
bjp_ig2102_scaffold_24083
Species: GWC2_Spirochaetes_52_13_curated (50%)
4 1712 bp 49.24 5.56 98.13
bjp_ig2102_scaffold_10503
Species: GWC2_Spirochaetes_52_13_curated (100%)
4 3412 bp 51.23 4.34 98.12
bjp_ig2102_scaffold_20983
Order: Spirochaetales (50%)
4 1914 bp 51.88 3.55 98.12
bjp_ig2102_scaffold_14177
Species: Sphaerochaeta coccoides (50%)
2 2658 bp 49.51 4.09 98.08
bjp_ig2102_scaffold_41240
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
1 1089 bp 52.43 5.69 98.07
bjp_ig2102_scaffold_10963
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
4 3292 bp 51.25 4.31 98.06
bjp_ig2102_scaffold_38992
Order: Spirochaetales (66.67%)
3 1143 bp 53.63 3.83 97.90
bjp_ig2102_scaffold_31333
Species: GWC2_Spirochaetes_52_13_curated (50%)
2 1376 bp 53.78 3.29 97.89
bjp_ig2102_scaffold_39222
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1137 bp 46.09 4.91 97.89
bjp_ig2102_scaffold_37783
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 1174 bp 47.61 4.63 97.87
bjp_ig2102_scaffold_15778
Species: GWC2_Spirochaetes_52_13_curated (66.67%)
3 2437 bp 51.50 5.51 97.87
bjp_ig2102_scaffold_27238
Species: Sphaerochaeta pleomorpha (50%)
2 1545 bp 53.98 5.38 97.86
bjp_ig2102_scaffold_36188
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1217 bp 55.38 4.71 97.86
bjp_ig2102_scaffold_24800
Species: BJP_08E140C01_Spirochaeta_53_29 (66.67%)
3 1668 bp 47.60 5.97 97.84
bjp_ig2102_scaffold_8246
Species: GWC2_Spirochaetes_52_13_curated (75%)
4 4189 bp 55.19 4.15 97.83
bjp_ig2102_scaffold_16526
Species: GWC2_Spirochaetes_52_13_curated (50%)
2 2343 bp 56.38 4.51 97.82
bjp_ig2102_scaffold_40835
Species: GWC2_Spirochaetes_52_13_curated (50%)
2 1098 bp 56.38 4.13 97.81
bjp_ig2102_scaffold_14575
Species: BJP_08E140C01_Spirochaeta_53_29 (66.67%)
3 2604 bp 54.99 5.62 97.81
bjp_ig2102_scaffold_20431
Species: Treponema caldarium (50%)
2 1960 bp 54.39 5.01 97.81
bjp_ig2102_scaffold_26276
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1592 bp 52.83 4.27 97.80
bjp_ig2102_scaffold_5214
Species: GWC2_Spirochaetes_52_13_curated (55.56%)
9 6359 bp 52.96 4.30 97.80
bjp_ig2102_scaffold_36352
Order: Spirochaetales (66.67%)
3 1212 bp 54.29 3.99 97.77
bjp_ig2102_scaffold_20358
Species: BJP_08E140C01_Spirochaeta_53_29 (66.67%)
3 1967 bp 55.11 5.14 97.76
bjp_ig2102_scaffold_18820
Species: BJP_08E140C01_Spirochaeta_53_29 (66.67%)
3 2099 bp 48.50 4.60 97.76
bjp_ig2102_scaffold_10340
Order: Spirochaetales (80%)
5 3457 bp 55.11 4.72 97.71
bjp_ig2102_scaffold_16046
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 2401 bp 51.81 5.03 97.71
bjp_ig2102_scaffold_10071
Species: BJP_08E140C01_Spirochaeta_53_29 (66.67%)
3 3531 bp 54.89 3.85 97.71
bjp_ig2102_scaffold_14888
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 2558 bp 54.65 4.55 97.69
bjp_ig2102_scaffold_23850
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1726 bp 52.09 2.89 97.68
bjp_ig2102_scaffold_7341
Species: GWC2_Spirochaetes_52_13_curated (75%)
4 4656 bp 50.47 4.83 97.68
bjp_ig2102_scaffold_31400
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1373 bp 45.01 4.29 97.67
bjp_ig2102_scaffold_10435
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
4 3432 bp 50.41 4.88 97.64
bjp_ig2102_scaffold_21107
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
2 1905 bp 54.17 5.15 97.64
bjp_ig2102_scaffold_39563
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1128 bp 47.61 2.95 97.61
bjp_ig2102_scaffold_9270
Genus: Sphaerochaeta (66.67%)
3 3787 bp 50.22 5.26 97.60
bjp_ig2102_scaffold_13284
Species: GWC2_Spirochaetes_52_13_curated (50%)
2 2807 bp 50.87 4.57 97.58
bjp_ig2102_scaffold_18545
Species: BJP_08E140C01_Spirochaeta_53_29 (60%)
5 2125 bp 51.53 4.90 97.55
bjp_ig2102_scaffold_18581
Species: GWC2_Spirochaetes_52_13_curated (100%)
3 2122 bp 50.94 6.19 97.55
bjp_ig2102_scaffold_39343
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1133 bp 53.66 3.47 97.44
Displaying items 301-350 of 1040 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.