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bjp_ig2102_scaffold_3874

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2102_scaffold_3874_1
Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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3..1202
DNA (1200bp) protein (400aa)
Probable tRNA sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094284}; EC=2.8.1.4 {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094270};; Sulfur carrier protein T
Probable tRNA sulfurtransferase n=1 Tax=Erysipelotrichaceae bacterium 3_1_53 RepID=E2SJJ2_9FIRM
thiazole biosynthesis/tRNA modification protein ThiI
bjp_ig2102_scaffold_3874_2
Streptococcus sanguinis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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1212..2057
DNA (846bp) protein (282aa)
Uncharacterized protein n=2 Tax=Streptococcus sanguinis RepID=F0FRT7_STRSA
Protein of hypothetical function DUF62 {ECO:0000313|EMBL:EGF14565.1}; TaxID=888813 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus san
hypothetical protein
bjp_ig2102_scaffold_3874_3
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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2061..3446
DNA (1386bp) protein (462aa)
Signal recognition particle protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YD21_9FIRM
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotric
signal recognition particle protein Srp54
bjp_ig2102_scaffold_3874_4
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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3535..3807
DNA (273bp) protein (91aa)
UPI0002F4EBE4 related cluster n=1 Tax=unknown RepID=UPI0002F4EBE4
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania fil
rpsP; Ribosomal protein S16-like protein
bjp_ig2102_scaffold_3874_5
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

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3810..4058
DNA (249bp) protein (83aa)
Putative uncharacterized protein id=4675921 bin=GWF2_Firmicute_51_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=GWF2_Firmicute_51_9 organism_group=Firmicute
RNA-binding protein (KH domain) Tax=GWF2_Firmicutes_51_9_curated
hypothetical protein
bjp_ig2102_scaffold_3874_6
Erysipelothrix rhusiopathiae, Erysipelothrix, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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4089..4589
DNA (501bp) protein (167aa)
UPI0003B7A88F related cluster n=1 Tax=unknown RepID=UPI0003B7A88F
rimM; 16S rRNA-processing protein RimM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=650150 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae;
bjp_ig2102_scaffold_3874_7
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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4586..5317
DNA (732bp) protein (244aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltrans
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YD26_9FIRM
trmD; tRNA (guanine-N(1)-)-methyltransferase
bjp_ig2102_scaffold_3874_8
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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5418..5765
DNA (348bp) protein (116aa)
50S ribosomal protein L19 n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YD27_9FIRM
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holde
50S ribosomal protein L19
bjp_ig2102_scaffold_3874_9
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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5811..6434
DNA (624bp) protein (208aa)
Signal peptidase I {ECO:0000256|RuleBase:RU003993}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU003993};; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae
Signal peptidase I n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YD28_9FIRM
lepB; signal peptidase I
bjp_ig2102_scaffold_3874_10
[Eubacterium] dolichum, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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6447..7301
DNA (855bp) protein (285aa)
UPI0002FE1D70 related cluster n=1 Tax=unknown RepID=UPI0002FE1D70
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=428127 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="[Eubacterium] dolichum DS
ylqF; ribosome biogenesis GTP-binding protein YlqF
bjp_ig2102_scaffold_3874_11
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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7288..7896
DNA (609bp) protein (203aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SA
Ribonuclease HII n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CD51_9FIRM
rnhB; ribonuclease HII
bjp_ig2102_scaffold_3874_12
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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7954..8580
DNA (627bp) protein (209aa)
UPI0003158D54 related cluster n=1 Tax=unknown RepID=UPI0003158D54
DNA protecting protein DprA {ECO:0000313|EMBL:EEC89355.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella b
Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake
Displaying 12 items

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