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BJP_IG2102_Hor_167_2014_Bacteroidetes_40_12_curated

BJP_IG2102_unknown_41_1
In projects: 08E140C01_zone5_2014  |  ggdb  |  horonobe_genomes

Consensus taxonomy:

Metagenomic Context

Manually curated genome Candidate phylum (ggDB)

Properties

Avg. coverage: 1.00 Longest contig: 168.50 Kbp Bin length: 2.68 Mbp GC content: 40.69 %
Contigs count: 58 Features count: 2277 rRNAs count: 0 tRNAs count: 0

Genome completeness

near complete RP 49 / 55 BSCG 49 / 51 MC: 1 ASCG 13 / 38 MC: 2
Displaying items 1-50 of 58 in total
contig # features sequence size GC content (%) Cov Coding Density (%) notes
bjp_ig2102_scaffold_97_curated 132 144345 bp 41.53 1.00 96.84
bjp_ig2102_scaffold_71_curated 130 168495 bp 39.80 1.00 93.99
bjp_ig2102_scaffold_84_curated 127 156566 bp 38.23 1.00 95.54
bjp_ig2102_scaffold_107_curated 118 137334 bp 41.15 1.00 95.79
bjp_ig2102_scaffold_89_curated 118 148937 bp 39.95 1.00 93.35
bjp_ig2102_scaffold_178_curated 101 107106 bp 40.83 1.00 95.53
bjp_ig2102_scaffold_357_curated 101 99706 bp 42.71 1.00 95.02
bjp_ig2102_scaffold_172_curated 97 109428 bp 39.06 1.00 95.87
bjp_ig2102_scaffold_126_curated 95 135040 bp 42.29 1.00 89.94
bjp_ig2102_scaffold_237_curated 80 90017 bp 41.01 1.00 93.78
bjp_ig2102_scaffold_440_curated 49 56328 bp 40.09 1.00 94.99
bjp_ig2102_scaffold_404_curated 49 59547 bp 40.27 1.00 94.53
bjp_ig2102_scaffold_640_curated 48 62801 bp 41.45 1.00 96.24
bjp_ig2102_scaffold_628_curated 45 43704 bp 41.25 1.00 92.98
bjp_ig2102_scaffold_485_curated 44 53049 bp 41.58 1.00 96.28
bjp_ig2102_scaffold_593_curated 44 46850 bp 39.90 1.00 95.55
bjp_ig2102_scaffold_483_curated 43 53249 bp 41.55 1.00 95.65
bjp_ig2102_scaffold_502_curated 41 52047 bp 42.83 1.00 93.38
bjp_ig2102_scaffold_608_curated 38 46455 bp 35.89 1.00 87.50
bjp_ig2102_scaffold_1164_curated 37 26237 bp 41.73 1.00 94.08
bjp_ig2102_scaffold_745_curated 34 38303 bp 42.98 1.00 95.45
bjp_ig2102_scaffold_1228_curated 33 32331 bp 40.34 1.00 90.68
bjp_ig2102_scaffold_848_curated 31 34201 bp 42.45 1.00 94.34
bjp_ig2102_scaffold_665_curated 31 41773 bp 39.81 1.00 95.77
bjp_ig2102_scaffold_709_curated 31 39949 bp 42.68 1.00 95.38
bjp_ig2102_scaffold_816_curated 29 35227 bp 36.49 1.00 95.50
bjp_ig2102_scaffold_724_curated 29 38847 bp 42.14 1.00 96.80
bjp_ig2102_scaffold_722_curated 29 39375 bp 41.92 1.00 91.17
bjp_ig2102_scaffold_1002_curated 29 29900 bp 39.45 1.00 94.64
bjp_ig2102_scaffold_973_curated 27 30478 bp 40.00 1.00 91.75
bjp_ig2102_scaffold_852_curated 27 33992 bp 41.92 1.00 96.73
bjp_ig2102_scaffold_1129_curated 26 27053 bp 42.61 1.00 93.17
bjp_ig2102_scaffold_1114_curated 25 27318 bp 41.12 1.00 94.22
bjp_ig2102_scaffold_1113_curated 25 27292 bp 41.41 1.00 93.84
bjp_ig2102_scaffold_773_curated 25 36961 bp 41.61 1.00 93.60
bjp_ig2102_scaffold_1078_curated 24 28184 bp 43.28 1.00 94.73
bjp_ig2102_scaffold_1123_curated 21 27222 bp 35.23 1.00 83.48
bjp_ig2102_scaffold_1049_curated 20 28842 bp 42.72 1.00 94.62
bjp_ig2102_scaffold_1850_curated 19 17295 bp 39.23 1.00 94.74
bjp_ig2102_scaffold_1674_curated 18 19068 bp 42.24 1.00 95.00
bjp_ig2102_scaffold_1611_curated 18 19736 bp 40.06 1.00 94.08
bjp_ig2102_scaffold_1849_curated 15 17349 bp 41.67 1.00 95.04
bjp_ig2102_scaffold_2509_curated 15 12965 bp 32.15 1.00 82.82
bjp_ig2102_scaffold_1901_curated 14 18483 bp 43.28 1.00 92.18
bjp_ig2102_scaffold_1543_curated 14 20523 bp 38.24 1.00 96.70
bjp_ig2102_scaffold_1508_curated 14 20910 bp 41.98 1.00 90.17
bjp_ig2102_scaffold_1345_curated 14 22834 bp 39.80 1.00 92.34
bjp_ig2102_scaffold_2089_curated 13 15465 bp 42.35 1.00 95.89
bjp_ig2102_scaffold_2672_curated 13 12252 bp 43.58 1.00 86.17
bjp_ig2102_scaffold_2459_curated 12 13318 bp 41.03 1.00 98.12
Displaying items 1-50 of 58 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.