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BJP_ig2599_Miz_0z1_300_2014_RIFOXYC2_FULL_Ignavibacteria_38_25_curated_36_52

BJP_IG2599_RIFOXYC2_FULL_Ignavibacteria_38_25_curated_36_52

In projects: 09MI20_z1_2014 | 09mi20_drep | mizunami_genomes

Consensus taxonomy: RIFOXYC2_FULL_Ignavibacteria_38_25_curated → Ignavibacteriales → Ignavibacteria → Ignavibacteriae → Bacteria

Metagenomic Context

Parent: BJP_IG2599_UNK

Properties

Avg. coverage: 51.63 Longest contig: 45.86 Kbp Bin length: 3.02 Mbp GC content: 35.83 %

Contigs count: 518 Features count: 3115 rRNAs count: 0 tRNAs count: 32

Genome completeness

partial RP 42 / 55 MC: 2 BSCG 39 / 51 ASCG 13 / 38 MC: 2

Description

(J)

Displaying items 401-450 of 518 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
bjp_ig2599_scaffold_31777 Species: RIFOXYA2_FULL_Ignavibacteria_37_17_curated (100%)	2	1838 bp	33.46	52.80	99.89
bjp_ig2599_scaffold_47880 Species: Melioribacter roseus (50%)	2	1338 bp	35.43	51.12	80.72
bjp_ig2599_scaffold_38777 Species: RIFOXYC2_FULL_Ignavibacteria_38_25_curated (100%)	2	1579 bp	38.51	56.05	100.13
bjp_ig2599_scaffold_36735 Species: RIFOXYC2_FULL_Ignavibacteria_38_25_curated (100%)	2	1646 bp	34.69	50.85	96.23
bjp_ig2599_scaffold_26747 Species: RIFOXYC2_FULL_Ignavibacteria_38_25_curated (50%)	2	2095 bp	34.03	52.05	100.10
bjp_ig2599_scaffold_36739 Species: RIFOXYC2_FULL_Ignavibacteria_38_25_curated (50%)	2	1645 bp	36.84	43.40	88.27
bjp_ig2599_scaffold_47635 Species: RIFOXYC2_FULL_Ignavibacteria_38_25_curated (50%)	2	1343 bp	38.27	47.47	95.53
bjp_ig2599_scaffold_59416 Species: RIFOXYC2_FULL_Ignavibacteria_38_25_curated (100%)	2	1128 bp	33.24	57.05	98.14
bjp_ig2599_scaffold_101548 Species: RIFOXYD12_FULL_Ignavibacteria_36_8_curated (50%)	2	1297 bp	31.69	55.17	87.43
bjp_ig2599_scaffold_30965 Species: Melioribacter roseus (50%)	2	3484 bp	35.68	53.04	80.94
bjp_ig2599_scaffold_19853 Species: RBG_13_Ignavibacteria_36_8_curated (50%)	2	2652 bp	36.65	58.48	76.02
bjp_ig2599_scaffold_60976 Species: BJP_IG2102_Ignavibacteriales_35_8 (50%)	2	1105 bp	37.83	52.40	93.67
bjp_ig2599_scaffold_34604 Species: CG_CP01_01 (50%)	2	1720 bp	38.49	60.52	99.07
bjp_ig2599_scaffold_31073 Species: RIFOXYC2_FULL_Ignavibacteria_38_25_curated (100%)	2	1870 bp	33.64	42.99	95.13
bjp_ig2599_scaffold_38062 Species: RIFOXYC2_FULL_Ignavibacteria_38_25_curated (50%)	2	1601 bp	35.04	40.10	99.69
bjp_ig2599_scaffold_52070 Species: RIFOXYC2_FULL_Ignavibacteria_38_25_curated (50%)	2	1251 bp	32.93	36.21	68.82
bjp_ig2599_scaffold_18506 Species: RIFOXYC2_FULL_Ignavibacteria_38_25_curated (50%)	2	2810 bp	35.37	53.54	92.14
bjp_ig2599_scaffold_5476 Species: RIFOXYC2_FULL_Ignavibacteria_38_25_curated (50%)	2	7894 bp	39.79	54.99	82.73
bjp_ig2599_scaffold_31333 Species: RIFOXYC2_FULL_Ignavibacteria_38_25_curated (100%)	2	1858 bp	36.22	45.69	99.95
bjp_ig2599_scaffold_52852 Species: RIFOXYC2_FULL_Ignavibacteria_38_25_curated (100%)	2	2158 bp	36.10	42.61	80.21
bjp_ig2599_scaffold_46477 Species: RIFOXYC2_FULL_Ignavibacteria_38_25_curated (100%)	2	1369 bp	36.16	49.63	97.74
bjp_ig2599_scaffold_32053 Species: RIFOXYC2_FULL_Ignavibacteria_38_25_curated (50%)	2	1827 bp	33.22	49.18	84.89
bjp_ig2599_scaffold_22506 Species: RIFOXYA2_FULL_Ignavibacteria_37_17_curated (50%)	2	2400 bp	37.04	57.69	89.25
bjp_ig2599_scaffold_63338 Species: RIFOXYA2_FULL_Ignavibacteria_37_17_curated (50%)	2	1071 bp	37.25	46.92	86.27
bjp_ig2599_scaffold_55075 Species: Melioribacter roseus (100%)	2	2059 bp	34.77	47.50	100.10
bjp_ig2599_scaffold_6479 Species: RIFOXYD12_FULL_Ignavibacteria_36_8_curated (50%)	2	6245 bp	39.22	48.81	99.49
bjp_ig2599_scaffold_16924 Species: RIFOXYC2_FULL_Ignavibacteria_38_25_curated (100%)	2	3018 bp	36.28	59.64	100.00
bjp_ig2599_scaffold_31110 Species: RIFOXYC2_FULL_Ignavibacteria_38_25_curated (100%)	2	1867 bp	33.80	49.17	90.47
bjp_ig2599_scaffold_40119 Species: Melioribacter roseus (50%)	2	1537 bp	32.40	45.58	100.13
bjp_ig2599_scaffold_60766 Species: RIFOXYC2_FULL_Ignavibacteria_38_25_curated (50%)	2	1107 bp	33.33	52.17	101.63
bjp_ig2599_scaffold_41325 Species: RIFOXYC2_FULL_Ignavibacteria_38_25_curated (100%)	2	1502 bp	35.15	47.64	71.30
bjp_ig2599_scaffold_66938 Species: RIFOXYC2_FULL_Ignavibacteria_38_25_curated (100%)	2	1026 bp	33.24	45.61	97.37
bjp_ig2599_scaffold_14421 Species: RIFOXYC2_FULL_Ignavibacteria_38_25_curated (100%)	2	3421 bp	36.92	50.38	94.18
bjp_ig2599_scaffold_40641 Species: RIFOXYA2_FULL_Ignavibacteria_37_17_curated (50%)	2	1521 bp	35.50	50.59	93.10
bjp_ig2599_scaffold_33092 Species: RIFOXYC2_FULL_Ignavibacteria_38_25_curated (50%)	2	1782 bp	34.18	56.31	99.66
bjp_ig2599_scaffold_59500 Species: GWB2_Ignavibacteria_35_6b_curated (50%)	2	1127 bp	38.51	43.12	62.29
bjp_ig2599_scaffold_24090 Species: RIFOXYA2_FULL_Ignavibacteria_37_17_curated (50%)	2	2271 bp	36.72	44.52	99.74
bjp_ig2599_scaffold_53336 Species: R_Ignavibacteria_55_14 (50%)	2	1229 bp	38.32	41.62	59.07
bjp_ig2599_scaffold_34155 Species: RIFOXYC2_FULL_Ignavibacteria_38_25_curated (100%)	2	1737 bp	34.72	48.27	79.10
bjp_ig2599_scaffold_71059 Species: RIFOXYC2_FULL_Ignavibacteria_38_25_curated (50%)	2	1614 bp	32.65	55.20	53.53
bjp_ig2599_scaffold_43207 Species: RIFOXYC2_FULL_Ignavibacteria_38_25_curated (100%)	2	1450 bp	37.52	48.00	101.38
bjp_ig2599_scaffold_64724 Species: Melioribacter roseus (50%)	2	1704 bp	35.92	54.14	81.34
bjp_ig2599_scaffold_68849 Species: RIFOXYC2_FULL_Ignavibacteria_38_25_curated (100%)	2	1002 bp	34.73	36.83	100.00
bjp_ig2599_scaffold_32878 Species: RIFOXYC2_FULL_Ignavibacteria_38_25_curated (100%)	2	1792 bp	32.59	53.32	89.90
bjp_ig2599_scaffold_61228 Species: RIFOXYC2_FULL_Ignavibacteria_38_25_curated (50%)	2	2012 bp	34.10	42.64	97.96
bjp_ig2599_scaffold_66205 Species: RBG_13_Ignavibacteria_36_8_curated (50%)	2	1035 bp	35.17	51.01	79.71
bjp_ig2599_scaffold_24882 Species: RIFOXYC2_FULL_Ignavibacteria_38_25_curated (50%)	2	2219 bp	34.61	42.38	99.64
bjp_ig2599_scaffold_23085 Species: Melioribacter roseus (100%)	2	2352 bp	33.46	54.97	83.16
bjp_ig2599_scaffold_51523 Species: RIFOXYC2_FULL_Ignavibacteria_38_25_curated (100%)	2	1263 bp	34.60	53.80	80.76
bjp_ig2599_scaffold_52668 Species: Melioribacter roseus (50%)	2	1241 bp	34.97	53.67	98.63

Displaying items 401-450 of 518 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

Warning! This will delete the current organism (BJP_ig2599_Miz_0z1_300_2014_RIFOXYC2_FULL_Ignavibacteria_38_25_curated_36_52) and add all its contigs / scaffolds to the organism you choose below

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Other organism

BJP_ig2599_Miz_0z1_300_2014_RIFOXYC2_FULL_Ignavibacteria_38_25_curated_36_52

Description

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

Merge with other organism

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