ggKbase home page

bjp_ig3402_scaffold_28164_2

Organism: BJP_Ig3402_Miz_0z3_300_2014_Nitrospirae_40_5_curated

partial RP 29 / 55 MC: 2 BSCG 27 / 51 ASCG 7 / 38 MC: 1
Location: comp(214..1605)

Top 3 Functional Annotations

Value Algorithm Source
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum) similarity UNIREF
DB: UNIREF100
  • Identity: 55.2
  • Coverage: 464.0
  • Bit_score: 478
  • Evalue 7.40e-132
murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase similarity KEGG
DB: KEGG
  • Identity: 44.8
  • Coverage: 453.0
  • Bit_score: 393
  • Evalue 5.20e-107
Tax=GWB2_Nitrospirae_47_37_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 55.2
  • Coverage: 464.0
  • Bit_score: 478
  • Evalue 1.00e-131

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWB2_Nitrospirae_47_37_curated → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 1392
GTGTCTTTATTTCTAAATACTAGGGATATTATCAAAGCCGTTGGTGGTAAAATACTTAATAACTCTTCTGAATCATTTGCAGGCATATCTATTGATTCAAGAAnnnnnnnnGATGGCGAACTGTTCATTGCCTTAAGAGGCGATAATCACGATGGACACGACTTTATTCAGGACGCCCTTAAGAAAGGGAAGGGCGCTATAATCAGCAATGACTGGGTTCAACACAATACCCTTGATATTGATAATAAAACATATATAATTGTAGAAGATACACTGAATGCACTTCAAAATCTGTCAGCATTTATTAGAAATGGCTTTAACGGTCGGGTCTTTGCAGTCGTTGGCAGCAACGGAAAAACAACCACGAAGGAACTGCTATCTTGCATATTAGAAAGAAGGTGGGATGTGTTAAAAACAACCGGCAATTTTAATAACCATATCGGAATGCCGCTTTGCATCTGCCGATTAGATGCAAATAAACAAGTTATGTTATTGGAAATGGGAGCAAACAGACCTAAAGATATAGATAATCTTTGCAGGATTGCCCGACCAGATACCGCAGTTGTTACTAATATCGGGTATGAGCATATTGAAGGCTTCGGTTCCCTTGAGATGGTCAGGGAGTCCGAGTTGGAAATCCTGCCTTATGTTAGAAACCTTGCAGTCAACGCAGATGACCAATTTCTGATGGACGGCATATATAAAAAATATAAAGGTAATCTCATAACATTTGGCATTCAAGCACCATTTTTAAATGTAAGTGCGAGTGATATTGATTTTTCTGAGGATTATACCAGCTTTCATCTCAATGCTGGTGGCGCACCTGTTTTTGTGAAATCCAAACTGACAGGTCTTTTTAATGTTTATAACTGCCTCGCAGCGGCATCTGCTGCTCTGACCGCTGACTTTGGTCTTGATGAGATAAAAAAAGGCATAGAGTCATTTGAAGGTGTGAGACTAAGGTTCGAATTAAAAAGGCATAAGGGGATAACTTTTTTGAATGATGTTTATAATGCCAATCCATCATCCATGGAGGCATCTGCTAAAGAAATGTTGAGGATTTTCAACGGCTCTCATTTAAAAGACAACGGATATAAAAGAACTATTGTTGTTTTGGGGGATATGCTTGAACTTGGTGACTTTGCGATCACTGCTCATAAGAATTTGGGCAGTCTGCTTTCAGAACTAAATGTTGATACATTTATTGGTGTTGGCAATATGATGGTTTATGCCCTTTCCTGTTTTACAGGCAAAGCAATACCTGCCGAGAACTCTGTGGCTGCAGGCGAAAGGCTTGCAGCGATACTCAGAGAAGGTGATTTGGTTCTGATAAAGGGTTCACGAGGTATGAAAATGGAAAATGTTTTTGCTGTCATAGAAAGGCTTGTTTGA
PROTEIN sequence
Length: 464
VSLFLNTRDIIKAVGGKILNNSSESFAGISIDSRXXXDGELFIALRGDNHDGHDFIQDALKKGKGAIISNDWVQHNTLDIDNKTYIIVEDTLNALQNLSAFIRNGFNGRVFAVVGSNGKTTTKELLSCILERRWDVLKTTGNFNNHIGMPLCICRLDANKQVMLLEMGANRPKDIDNLCRIARPDTAVVTNIGYEHIEGFGSLEMVRESELEILPYVRNLAVNADDQFLMDGIYKKYKGNLITFGIQAPFLNVSASDIDFSEDYTSFHLNAGGAPVFVKSKLTGLFNVYNCLAAASAALTADFGLDEIKKGIESFEGVRLRFELKRHKGITFLNDVYNANPSSMEASAKEMLRIFNGSHLKDNGYKRTIVVLGDMLELGDFAITAHKNLGSLLSELNVDTFIGVGNMMVYALSCFTGKAIPAENSVAAGERLAAILREGDLVLIKGSRGMKMENVFAVIERLV*