ggKbase home page

bjp_ig3402_scaffold_16311_2

Organism: BJP_Ig3402_Miz_0z3_300_2014_Nitrospirae_40_5

partial RP 35 / 55 MC: 3 BSCG 36 / 51 MC: 2 ASCG 8 / 38 MC: 1
Location: comp(1254..1568)

Top 3 Functional Annotations

Value Algorithm Source
rnp-1 like RNA-binding protein Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 64.1
  • Coverage: 103.0
  • Bit_score: 130
  • Evalue 1.20e-27
RNP-1 like RNA-binding protein id=3668558 bin=GWC2_Nitrospirae-rel_56_14 species=Bdellovibrio bacteriovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA similarity UNIREF
DB: UNIREF100
  • Identity: 60.6
  • Coverage: 104.0
  • Bit_score: 121
  • Evalue 5.20e-25
RRM domain-containing RNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 56.1
  • Coverage: 98.0
  • Bit_score: 103
  • Evalue 3.10e-20

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 315
ATGCCAAAGAAGATCTATGTAGGGAACCTCTCTTACCAGACGGATGAAGATTCCCTGAAAAATGCTTTTGATTCAATCGGAGAGGTTCTGTCTGTAAGGATTATCAAGGATCCGACAGGCCGTTCAAAGGGGTTTGGCTTTGTTGAAATGACATCTGACGAGGATGCCGATAGGGCTATCTCCAGCCTGAATGGGACTGATTTTATGGGAAGAAATATGATAGTCAATGAGGCAAGGCCTCAAACAGACAAAAGCAGCACGGGAGCTTCGAGAAAACCTTTCAGAGGCGGAAGGGAGCAGTTTAAACGCAGATAA
PROTEIN sequence
Length: 105
MPKKIYVGNLSYQTDEDSLKNAFDSIGEVLSVRIIKDPTGRSKGFGFVEMTSDEDADRAISSLNGTDFMGRNMIVNEARPQTDKSSTGASRKPFRGGREQFKRR*