ggKbase home page

bjp_ig3402_scaffold_23434_3

Organism: BJP_Ig3402_Miz_0z3_300_2014_Nitrospirae_40_5

partial RP 35 / 55 MC: 3 BSCG 36 / 51 MC: 2 ASCG 8 / 38 MC: 1
Location: comp(791..1849)

Top 3 Functional Annotations

Value Algorithm Source
trmU1; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61); K00566 tRNA-specific 2-thiouridylase [EC:2.8.1.-] Tax=GWB2_Nitrospirae_47_37_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 59.6
  • Coverage: 354.0
  • Bit_score: 432
  • Evalue 5.00e-118
trmU1; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61) similarity KEGG
DB: KEGG
  • Identity: 48.7
  • Coverage: 349.0
  • Bit_score: 337
  • Evalue 3.30e-90
tRNA-specific 2-thiouridylase MnmA id=2315294 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum) similarity UNIREF
DB: UNIREF100
  • Identity: 59.6
  • Coverage: 354.0
  • Bit_score: 432
  • Evalue 3.50e-118
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWB2_Nitrospirae_47_37_curated → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 1059
ATGTCAGTTAAAATCATAGTTGGGATGAGCGGCGGGGTTGATTCAGCTATTGCCGCTTTTTTGCTAAAAGAGCAGGGATTTGATGTCGAAGGTGTGAGCTTTGTCTTATATGAAGCAAGAACGCAGAAGACATTTTCTAAAGCTCCTTGCTGTTCAGTTAAGGCAATGAAAGATGCTCAAGAAACCGCTCAGATACTCGGCATAAAGCATACGATAATAGATCTCAGGGATGAATTTATAAAAAAAGTTATAGAACCATTCATATTTTCATACTCAAAGGGGATAACACCAAATCCATGTATTGTTTGCAATAAACACATCAAATTCCCTTACTTGATTAGAACTGCTGATGACAATAATGCTGCCTTAATAGCCACAGGTCATTATGCAAATACTGCCTTAGAGGATAATACCCCTTTATTGATGAAGGCGTTAGACCCTAAAAAAGACCAATCTTATGTTCTCTATTCAATTGGATATGAAACCTTATCGCGGCTTAAGCTCCCTCTTTGGGAAAAAACTAAACAAGAAGTCAGGGAGATGGCTTATAAACTGAGTATTCCTGCTGCAAAAAGAAAGGAAAGTCAGGAAATCTGTTTCATACAGAATGATGGATATTTTAGATTTCTTGAGGGCATGATTGAACCAAAAGCAGGACCGGTTATAGACGCTGAGACGGAAAAGATATTGGGATATCACAAAGGGATACATTTATTCACCATCGGGCAAAGGAAAAGGCTCGGCATAGCAGCATTAGAGCCCCGATATGTTATAAGGATTGATGCAACCCAAAATGCAGTTTATATCGGCACAAAAGATATGGCGATGCAAAAAGAGATAATCGTAAATGAGATCAACTGGCTTTTGACCAAAAAAGATACCTTCAGGGCAACCGTCAAGATAAGGTCTATGATGAAGGATGAGCCGGCAATAATAGAGATAATTGACAAGCAAAAAGTCAGAATAGTTTTTGAACAGCCCCAGTGGGCGCCTGCCCCCGGACAGAGCGCTGTATTTTATCAAGACAATGTAGTTATGGGCGGAGGGGTTATAATTTAA
PROTEIN sequence
Length: 353
MSVKIIVGMSGGVDSAIAAFLLKEQGFDVEGVSFVLYEARTQKTFSKAPCCSVKAMKDAQETAQILGIKHTIIDLRDEFIKKVIEPFIFSYSKGITPNPCIVCNKHIKFPYLIRTADDNNAALIATGHYANTALEDNTPLLMKALDPKKDQSYVLYSIGYETLSRLKLPLWEKTKQEVREMAYKLSIPAAKRKESQEICFIQNDGYFRFLEGMIEPKAGPVIDAETEKILGYHKGIHLFTIGQRKRLGIAALEPRYVIRIDATQNAVYIGTKDMAMQKEIIVNEINWLLTKKDTFRATVKIRSMMKDEPAIIEIIDKQKVRIVFEQPQWAPAPGQSAVFYQDNVVMGGGVII*