ggKbase home page

Ig5772_scaffold_2379_4

Organism: Ig5772_Miz_1z4_300_2015_Bacteria_68_5_Firmicutes-like

partial RP 22 / 55 MC: 1 BSCG 26 / 51 MC: 4 ASCG 9 / 38
Location: 1700..5329

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1629717 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c4b.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.2
  • Coverage: 999.99
  • Bit_score: 1073
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SL23_THEM7 similarity UNIREF
DB: UNIREF100
  • Identity: 49.9
  • Coverage: 999.99
  • Bit_score: 1054
  • Evalue 0.0
  • rbh
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 49.9
  • Coverage: 999.99
  • Bit_score: 1054
  • Evalue 0.0
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Peptococcaceae bacterium BRH_c4b → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3630
GTGAACAGGCCTAGAGGCCCCGACGCCATCAGGCAGTTCCTTGACGAGGTGTCTTCCTTCCCGGAGGTCCGCTCGCTCATGACCCACCTGGCCCCCGGTTCGGCCCAGGCGGTCCACGGTGTCGGAGGTTCGGTCAAGACCCTTCTCGCGGCCGCGGCTCATGCGGCCAGGCCCTTTCCGTCGATCCTCGTGTGCGCCGACCTCGAGGTCGCCCGCCGCGCCGAGAACGACCTCTCGACCTGGCTCGGCGAAGACTCGGTGACCATCCTGCCGGCGCGCGAGTTCTCGCCCCTGGGGGCTCTGGCCCAGTCGGGTGAAGTGCAGGCGCAGAGACTCTGGATCCTCGATGCCCTCCTGGCCGAGAACCCCCTGCTCGTGGTCGCCCCCGTGGAGGCTGTGGTCGGGCTCGTCCCGTCTCCCTCGCGCCTCGGGCGGTTCTCGCTGGTCGTCCGGAAGGGTTGGCGGTCGGAGCCCCACGAACTGGCCCGGATGCTGGTGGCATCCGGGTACCAGCGGGCCGCCCTCGTGGAGCACCCCGGCGACTTCAGCCTGAGGGGCGGTATCGTCGATGTCTTCCCCCCGACCGGGGAGCCTCACCGCGTTGAGTTCGCGGGTGACGAGGTCGCCTCCATCCGGGAGTTCTCGGCTGCGACCCAGAAGTCGAGTCATGAGCTCGGTGAGGTCCGCCTGGGTCCGGCCAGTGAGTGGGTCCTGGACCCGGACGACCTGGCCCAGTTGGCCCTGAAGGTGCGCCGGGAGTCGGTCCAGGCCGCGAAACGCCTGGAGGGGAGTGGCCGTCTCGAGGCGGCCGCCCGCCTGAAGTCCAAGGTGGCAACCGATCTTGAGAAGATGGAGGCGGGCCTGGCCCTCCCGGACCTGGATGCCTACGCCGCCTACGTCGAGCCCAACCCGGTCACCATCCTCGACTACCTGCCCCCCGGGGCTGCAGTGTTCCTGGACGAGCCGTCGCGGTTGGAGCAGGCGGGCGAGCACCTCCAGGCCGAGCGGGCCGAGCGGCTGGCCGCCCTCCTCGAGAGCGGCGGTCTGCTCAGGTCGCAGGCCGAGGCGTGGGTTCCCTTCGGGGAGATTCTGCGCCGGGCCGCCCAGCGGGCCCCGGTCTACCTCACCCAGATGCTCCGGCGGGTGCCGGAGGGAGACCTCAAGAACATCGTCAGCCTCCGCTACCAGACCATCCCGTCATTCCAGGGCCAGTGGGCCGACTTCGGATCGGAACTCGGGCGGTGGCGCCGGGCCGGCGACCGCGTGCTGCTCCTGGCTTCGAGCCGGGAGGCCGCCGCAGCCCTCCCCCGTTCCCTGAAGGAGTTCGACGTCGGAGCGGCGGAGGTCTTCTCACCGGAAAAGCCCCCCGGCCAGGTGGTCGTTACCCGGGGGAGCCTGGAGGGCGGCTTCCACCTTCCCGCTGCCAGGCTGCGCGTGGTGACCGACGCCCAGATACGCGGGCGGGCCCCGCGCCGGAGGCGACGCCGCCCGGCGGCCGGTCTGCCGGAAGGGGTGGCCCGCAGCCTCACCTCCTACCGCGAACTCGAGACCGGGGACTACGTGGTCCACGTCAACCACGGGATAGGCGTCTATCTCGGCATCAAGAGCCTGGAGATAGAAGGGGTCACCCGCGACTACATCTTCATCAAGTACGATGGTGAGGACCGTCTCTACGTGCCGACCGATCAGGTCGGGTTCATCCAGAAGTACATCGGAGTCGAAGGGCAGGAGCCCAAGATACACCGCCTGGCGGGAACCGAGTGGACCAGAGCCAAGAAGCGGGTCAAGGACTCGGTTCAGAAATTGGCCGTGGACCTGGTCAAGCTCTACGCCCAGCGTCAGACTATTCCCGGGCACGCCGCCGCCCCGGACACGCCCTGGCAGAGCGAGTTCGAGGCCGGCTTCCGCTACGAGGAGACACCCGACCAGCTGGTGGCGGTCGAGGAGATCAAGCGTGACATGGAACGGCCGACCCCGATGGACCGGCTCCTCTGCGGTGACGTCGGCTACGGCAAGACCGAGGTGGCCGTGCGGGCCGCCTTCAAGGCGGTCATGGACGACAAGCAGGTCGCCGTCCTGGTGCCGACCACCGTCCTGGCCCAGCAGCACTACAGCACCTTCCGCGAGCGTTTCTCCGGATACCCGGTGAACATCGACCTGCTCAGCCGCTTCCGGTCGCGGCCCAGGCAGGAGAAGACGGTGAAGGACCTGAGGAGGGGAACGGTGGATATCGTCATCGGAACCCACCGCCTCCTCCAGCCCGACGTCACTTTTAAGGACCTCGGCCTTCTGGTCATCGACGAGGAACACCGCTTCGGAGTGGGCCATAAGGAACGGCTCAAGGAGCTCAAGACCAACGTCGACGTCCTCGTCCTGACGGCGACCCCCATTCCCCGCACCCTGAACATGGCCCTGGTCGGCCTCAGGGACATGAGCGTCATCGACACGCCGCCGGAGGACCGTTTCCCGGTCCAGACCTACGTTGTCGAGCACGACGAGGAAATGGTCCGCGACGCCATCCTTCGCGAGACGGCCAGGGGCGGCCAGGTCTTGTACGTCCACAACCGGGTCGAGACCATCGAGCGGGCGGCCTTCAGGCTGCACGAACTCCTGCCGAAGGCTCGCATCGCCGTGGGCCACGGCCAGATGAAAGAGGACACCCTCGAGAGAGTGATGATGGATTTCCTCGACGGGGAGTACGATATCCTAGTCTCGACGACCATCATCGAGTCGGGGCTGGACATGCCCAACGTCAACACCCTTATCGTGGAGGAGGCGGACAAGCTCGGCCTGGCACAGCTCTACCAGCTCCGAGGGCGCGTGGGGCGCTCGAACCGGGTCGCCTACGCCTACTTCACCTACCGGCCGGGGCGCGTCATCCCCGAGGTGGCCGAGAAGAGACTCGAGGCCATCCGGGACTTCACCGAACTGGGGTCGGGCTACCGGATAGCCCTGCGTGACCTGGAGATACGGGGCGCCGGGAACCTGCTCGGGGCCGAACAGCACGGCTTCATGGCCTCGGTCGGCTTCGAGCTCTACTGCCGGATGCTGGAGGAGGCCGTCCGGGAGCTGAAAGGTGAGGCGGTCTCCCCCCGGGGCGAGACCACGGTCGAGGTGAGCATCGACGCCTTCATCCCCGACAGCTATGTGCCTGACTCACGTCAGAAGATGGAAACCTACCACCGGATCGCGGCCATCGCCGACCTGGCCGAGGCTGACGAGTTGGAGGAGGAGCTGGTCGACCGCTTCGGCCCTCTCCCGGCGTCGGTCGCCAATCTCCTGGCCGTAGCCAGGACGAGGGCGGCCGCTGGTCGCCTGGGAGTGGCGGCGATCTCACGCGAACCGGGTGGGGGTCTCTCGACCAGGTTCGAGCGACCCACGGCAGAGGTCCGCGGGGCCCTCGAGGCCCTTGGTGGGAAGCATCCCGGGGTCTCGGTCCGCTCGTCGCCCCGGGCGATGCTCCTTCTCTACCGGCGCGGGCGCCGGCCGAGTTTGGGGGACGCCAAGAAAGGCGATGGCCGGGGTAACGTTGAACTACTTAACGGTTTGCTCGACCTGCTTGTCCACGTATCCAGACGGATAGGCCACCGCGCGGACGCGGGTGGCCCTCTCGAGGGGAGAGGTCGCTGA
PROTEIN sequence
Length: 1210
VNRPRGPDAIRQFLDEVSSFPEVRSLMTHLAPGSAQAVHGVGGSVKTLLAAAAHAARPFPSILVCADLEVARRAENDLSTWLGEDSVTILPAREFSPLGALAQSGEVQAQRLWILDALLAENPLLVVAPVEAVVGLVPSPSRLGRFSLVVRKGWRSEPHELARMLVASGYQRAALVEHPGDFSLRGGIVDVFPPTGEPHRVEFAGDEVASIREFSAATQKSSHELGEVRLGPASEWVLDPDDLAQLALKVRRESVQAAKRLEGSGRLEAAARLKSKVATDLEKMEAGLALPDLDAYAAYVEPNPVTILDYLPPGAAVFLDEPSRLEQAGEHLQAERAERLAALLESGGLLRSQAEAWVPFGEILRRAAQRAPVYLTQMLRRVPEGDLKNIVSLRYQTIPSFQGQWADFGSELGRWRRAGDRVLLLASSREAAAALPRSLKEFDVGAAEVFSPEKPPGQVVVTRGSLEGGFHLPAARLRVVTDAQIRGRAPRRRRRRPAAGLPEGVARSLTSYRELETGDYVVHVNHGIGVYLGIKSLEIEGVTRDYIFIKYDGEDRLYVPTDQVGFIQKYIGVEGQEPKIHRLAGTEWTRAKKRVKDSVQKLAVDLVKLYAQRQTIPGHAAAPDTPWQSEFEAGFRYEETPDQLVAVEEIKRDMERPTPMDRLLCGDVGYGKTEVAVRAAFKAVMDDKQVAVLVPTTVLAQQHYSTFRERFSGYPVNIDLLSRFRSRPRQEKTVKDLRRGTVDIVIGTHRLLQPDVTFKDLGLLVIDEEHRFGVGHKERLKELKTNVDVLVLTATPIPRTLNMALVGLRDMSVIDTPPEDRFPVQTYVVEHDEEMVRDAILRETARGGQVLYVHNRVETIERAAFRLHELLPKARIAVGHGQMKEDTLERVMMDFLDGEYDILVSTTIIESGLDMPNVNTLIVEEADKLGLAQLYQLRGRVGRSNRVAYAYFTYRPGRVIPEVAEKRLEAIRDFTELGSGYRIALRDLEIRGAGNLLGAEQHGFMASVGFELYCRMLEEAVRELKGEAVSPRGETTVEVSIDAFIPDSYVPDSRQKMETYHRIAAIADLAEADELEEELVDRFGPLPASVANLLAVARTRAAAGRLGVAAISREPGGGLSTRFERPTAEVRGALEALGGKHPGVSVRSSPRAMLLLYRRGRRPSLGDAKKGDGRGNVELLNGLLDLLVHVSRRIGHRADAGGPLEGRGR*