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BJP_Ig2158_Hor_250_2014_Dechloromonas_aromatica_64_13

BJP_IG2158_BJP_IG2103_Dechloromonas_63_51_64_13
In projects: 09V250M02_2014  |  horonobe_genomes

Consensus taxonomy: BJP_IG2103_Dechloromonas_63_51  →  Dechloromonas  →  Rhodocyclales  →  Betaproteobacteria  →  Proteobacteria  →  Bacteria

Description

Missing SCG

Displaying items 101-150 of 312 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
bjp_ig2158_scaffold_1414
Species: BJP_IG2103_Dechloromonas_63_51 (93.75%)
16 16187 bp 65.90 14.26 96.15
bjp_ig2158_scaffold_1698
Species: BJP_IG2103_Dechloromonas_63_51 (87.5%)
16 14459 bp 62.27 12.76 91.98
bjp_ig2158_scaffold_2085
Order: Rhodocyclales (50%)
16 12422 bp 59.31 12.01 79.41
bjp_ig2158_scaffold_2358
Species: BJP_IG2103_Dechloromonas_63_51 (93.75%)
16 11397 bp 66.94 13.73 95.37
bjp_ig2158_scaffold_1464
Species: BJP_IG2103_Dechloromonas_63_51 (93.75%)
16 15847 bp 66.59 13.12 97.07
bjp_ig2158_scaffold_1209
Species: BJP_IG2103_Dechloromonas_63_51 (100%)
16 17912 bp 64.02 13.96 97.11
bjp_ig2158_scaffold_1725
Species: BJP_IG2103_Dechloromonas_63_51 (50%)
16 14350 bp 64.54 11.90 85.46
bjp_ig2158_scaffold_1727
Species: BJP_IG2103_Dechloromonas_63_51 (93.75%)
16 14339 bp 64.97 14.90 93.98
bjp_ig2158_scaffold_2722
Species: BJP_IG2103_Dechloromonas_63_51 (50%)
16 10209 bp 63.86 13.12 94.68
bjp_ig2158_scaffold_1424
Genus: Dechloromonas (80%)
15 16135 bp 67.29 12.71 91.22
bjp_ig2158_scaffold_1178
Order: Rhodocyclales (66.67%)
15 18275 bp 63.07 12.31 86.63
bjp_ig2158_scaffold_1699
Species: BJP_IG2103_Dechloromonas_63_51 (80%)
15 14458 bp 61.88 13.29 94.99
bjp_ig2158_scaffold_2107
Species: BJP_IG2103_Dechloromonas_63_51 (66.67%)
15 16063 bp 67.71 14.30 94.82
bjp_ig2158_scaffold_1473
Species: BJP_IG2103_Dechloromonas_63_51 (80%)
15 15793 bp 64.14 13.71 87.80
bjp_ig2158_scaffold_1483
Species: BJP_IG2103_Dechloromonas_63_51 (100%)
15 15740 bp 65.06 12.41 98.16
bjp_ig2158_scaffold_1244
Species: BJP_IG2103_Dechloromonas_63_51 (93.33%)
15 17616 bp 65.92 13.50 92.23
bjp_ig2158_scaffold_2680
Species: BJP_IG2103_Dechloromonas_63_51 (93.33%)
15 10373 bp 66.82 14.42 93.59
bjp_ig2158_scaffold_2242
Phylum: Proteobacteria (66.67%)
15 11794 bp 60.29 8.92 81.41
bjp_ig2158_scaffold_1865
Species: BJP_IG2103_Dechloromonas_63_51 (86.67%)
15 13522 bp 62.52 12.99 97.10
bjp_ig2158_scaffold_1116
Phylum: Proteobacteria (93.33%)
15 18952 bp 64.55 12.20 93.87
bjp_ig2158_scaffold_2160
Genus: Dechloromonas (50%)
14 12132 bp 58.92 13.17 75.94
bjp_ig2158_scaffold_2418
Species: BJP_IG2103_Dechloromonas_63_51 (92.86%)
14 11199 bp 63.03 12.74 89.61
bjp_ig2158_scaffold_1792
Species: BJP_IG2103_Dechloromonas_63_51 (92.86%)
14 13908 bp 64.54 13.74 97.30
bjp_ig2158_scaffold_1832
Species: BJP_IG2103_Dechloromonas_63_51 (92.86%)
14 13698 bp 66.30 13.93 95.58
bjp_ig2158_scaffold_1436
Genus: Dechloromonas (53.85%)
13 16052 bp 57.25 14.19 84.96
bjp_ig2158_scaffold_1443
Species: BJP_IG2103_Dechloromonas_63_51 (84.62%)
13 15975 bp 65.89 14.99 93.16
bjp_ig2158_scaffold_1720
Species: BJP_IG2103_Dechloromonas_63_51 (76.92%)
13 14381 bp 66.43 12.86 98.03
bjp_ig2158_scaffold_1768
Species: BJP_IG2103_Dechloromonas_63_51 (84.62%)
13 14028 bp 67.40 12.53 96.24
bjp_ig2158_scaffold_2775
Genus: Dechloromonas (76.92%)
13 10038 bp 59.48 13.49 98.19
bjp_ig2158_scaffold_1891
Species: BJP_IG2103_Dechloromonas_63_51 (76.92%)
13 13403 bp 63.75 11.68 91.61
bjp_ig2158_scaffold_1381
Species: BJP_IG2103_Dechloromonas_63_51 (92.31%)
13 16425 bp 64.89 14.22 95.51
bjp_ig2158_scaffold_2561
Species: BJP_IG2103_Dechloromonas_63_51 (83.33%)
12 10724 bp 65.78 14.25 94.82
bjp_ig2158_scaffold_1536
Species: Dechloromonas aromatica (66.67%)
12 15407 bp 63.23 12.94 91.26
bjp_ig2158_scaffold_2956
Species: BJP_IG2103_Dechloromonas_63_51 (50%)
12 9531 bp 59.56 13.22 86.68
bjp_ig2158_scaffold_2461
Species: BJP_IG2103_Dechloromonas_63_51 (91.67%)
12 11645 bp 65.31 14.98 93.93
bjp_ig2158_scaffold_2980
Species: BJP_IG2103_Dechloromonas_63_51 (91.67%)
12 9469 bp 61.98 14.27 94.38
bjp_ig2158_scaffold_3196
Order: Rhodocyclales (75%)
12 8982 bp 63.28 11.81 85.34
bjp_ig2158_scaffold_3490
Species: BJP_IG2103_Dechloromonas_63_51 (54.55%)
11 10934 bp 63.44 12.37 92.82
bjp_ig2158_scaffold_1681
Species: BJP_IG2102_Syntrophobacterales_60_12 (63.64%)
11 14526 bp 58.50 7.27 93.85
bjp_ig2158_scaffold_2331
Genus: Dechloromonas (54.55%)
11 11483 bp 66.51 11.72 92.50
bjp_ig2158_scaffold_2671
Species: BJP_IG2103_Dechloromonas_63_51 (81.82%)
11 10393 bp 61.86 13.15 94.55
bjp_ig2158_scaffold_1562
Species: BJP_IG2103_Dechloromonas_63_51 (90.91%)
11 15249 bp 59.64 14.26 97.01
bjp_ig2158_scaffold_2460
Class: Betaproteobacteria (63.64%)
11 11046 bp 56.12 11.11 90.12
bjp_ig2158_scaffold_3931
Species: BJP_IG2103_Dechloromonas_63_51 (81.82%)
11 10013 bp 63.97 14.76 92.85
bjp_ig2158_scaffold_2505
Species: BJP_IG2103_Dechloromonas_63_51 (81.82%)
11 10881 bp 62.38 14.10 89.74
bjp_ig2158_scaffold_2514
Species: BJP_IG2103_Dechloromonas_63_51 (63.64%)
11 10869 bp 63.92 11.59 89.04
bjp_ig2158_scaffold_2777
Species: BJP_IG2103_Dechloromonas_63_51 (90.91%)
11 10017 bp 62.54 13.70 88.35
bjp_ig2158_scaffold_3238
Species: BJP_IG2103_Dechloromonas_63_51 (50%)
10 8906 bp 64.80 14.79 83.88
bjp_ig2158_scaffold_1926
Genus: Dechloromonas (60%)
10 13278 bp 62.68 12.28 89.22
bjp_ig2158_scaffold_2842
Species: BJP_IG2103_Dechloromonas_63_51 (80%)
10 9844 bp 64.79 13.32 92.34
Displaying items 101-150 of 312 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.