ggKbase home page
Advanced Search
Search Help

BJP_Ig2158_Hor_250_2014_Clostridiales_40_5

BJP_IG2158_Clostridiales_40_5
In projects: 09V250M02_2014  |  horonobe_genomes

Consensus taxonomy: Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Metagenomic Context

Parent: BJP_IG2158_UNK

Properties

Avg. coverage: 5.31 Longest contig: 18.95 Kbp Bin length: 1.58 Mbp GC content: 40.23 %
Contigs count: 441 Features count: 1821 rRNAs count: 0 tRNAs count: 28

Genome completeness

partial RP 37 / 55 MC: 1 BSCG 40 / 51 MC: 1 ASCG 12 / 38 MC: 2
Displaying items 301-350 of 441 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
bjp_ig2158_scaffold_6488
Species: Thermobrachium celere (50%)
2 4975 bp 41.17 5.16 87.62
bjp_ig2158_scaffold_18352
Species: Clostridiaceae bacterium BRH_c20a (50%)
2 2006 bp 34.10 3.96 80.16
bjp_ig2158_scaffold_24617
Species: BJP_IG2158_Anaerolineales_38_74 (100%)
2 1538 bp 37.78 5.95 87.97
bjp_ig2158_scaffold_13643
Species: CG_Syntroph_01 (50%)
2 2601 bp 45.44 6.86 78.66
bjp_ig2158_scaffold_17836
Species: Dethiobacter alkaliphilus (50%)
2 2061 bp 36.78 5.82 63.61
bjp_ig2158_scaffold_22767
Species: Blautia sp. CAG:37 (50%)
2 1651 bp 43.00 3.09 86.67
bjp_ig2158_scaffold_17842
Species: R_OD1_Uhrbacteria_46_25 (50%)
2 2060 bp 38.11 5.24 88.69
bjp_ig2158_scaffold_14421
Species: Dethiobacter alkaliphilus (50%)
2 2480 bp 43.95 4.78 81.29
bjp_ig2158_scaffold_21734
Species: marine sediment metagenome (50%)
2 1722 bp 34.67 6.27 85.54
bjp_ig2158_scaffold_16839
Species: Dethiobacter alkaliphilus (50%)
2 2166 bp 37.49 5.61 91.83
bjp_ig2158_scaffold_20752
Species: Desulfosporosinus youngiae (100%)
2 1797 bp 44.24 4.17 100.67
bjp_ig2158_scaffold_22779
Species: BJP_IG2069_Spirochaetales_48_31 (100%)
2 1650 bp 44.85 3.91 78.55
bjp_ig2158_scaffold_26908
Species: Peptostreptococcaceae bacterium oral taxon 113 (50%)
2 1413 bp 37.51 7.22 87.47
bjp_ig2158_scaffold_22269
Species: CG_CP01_01 (100%)
2 1685 bp 40.06 3.83 86.71
bjp_ig2158_scaffold_13662
Species: CG_CP01_01 (50%)
2 2598 bp 42.88 4.68 78.06
bjp_ig2158_scaffold_15055
Species: Dethiobacter alkaliphilus (100%)
2 2387 bp 39.09 4.96 91.62
bjp_ig2158_scaffold_13156
Species: Syntrophomonas zehnderi (50%)
2 2686 bp 42.78 5.92 98.73
bjp_ig2158_scaffold_19245
Species: CG_CP01_01 (100%)
2 1921 bp 41.44 3.90 95.89
bjp_ig2158_scaffold_25549
Species: CG_CP01_01 (100%)
2 1484 bp 43.60 2.83 89.15
bjp_ig2158_scaffold_17354
Species: Dethiobacter alkaliphilus (50%)
2 2109 bp 41.68 5.48 97.30
bjp_ig2158_scaffold_16858
Species: RBG_19FT_COMBO_JS1_35_14_curated (100%)
2 2164 bp 35.44 4.99 76.39
bjp_ig2158_scaffold_9371
Species: Dethiobacter alkaliphilus (50%)
2 3620 bp 42.27 5.26 81.55
bjp_ig2158_scaffold_22542
Species: [Clostridium] stercorarium (50%)
2 1667 bp 39.65 4.77 95.38
bjp_ig2158_scaffold_22039
Species: CG_Omnitr_04 (50%)
2 1700 bp 37.59 7.06 88.59
bjp_ig2158_scaffold_26935
Species: Dethiobacter alkaliphilus (100%)
2 1411 bp 42.81 3.30 96.95
bjp_ig2158_scaffold_19012
Species: R_OD1_Wolfebacteria_38_11 (50%)
2 1944 bp 40.59 4.48 95.52
bjp_ig2158_scaffold_21266
Species: BJP_IG2069_Spirochaetales_48_31 (100%)
2 1757 bp 34.15 3.59 31.08
bjp_ig2158_scaffold_24674
Species: [Eubacterium] cellulosolvens (50%)
2 1534 bp 34.42 3.91 103.65
bjp_ig2158_scaffold_21785
Species: Desulfotomaculum reducens (50%)
2 1718 bp 38.53 4.80 99.36
bjp_ig2158_scaffold_17386
Species: Desulfotomaculum kuznetsovii (50%)
2 2106 bp 45.35 4.42 94.87
bjp_ig2158_scaffold_19540
Species: Geoalkalibacter subterraneus (100%)
2 1894 bp 43.82 4.20 86.33
bjp_ig2158_scaffold_17645
Species: Clostridium saccharobutylicum (50%)
2 2080 bp 35.82 6.20 57.55
bjp_ig2158_scaffold_16127
Species: Dethiobacter alkaliphilus (50%)
2 2252 bp 38.19 5.00 84.33
bjp_ig2158_scaffold_20554
Species: Dethiobacter alkaliphilus (100%)
2 1812 bp 42.38 3.73 93.54
bjp_ig2158_scaffold_17141
Species: Clostridium sp. CAG:411 (50%)
2 2132 bp 33.54 2.95 83.02
bjp_ig2158_scaffold_10981
Species: Dethiobacter alkaliphilus (50%)
2 3155 bp 41.49 5.37 80.44
bjp_ig2158_scaffold_16390
Species: CG_CP01_01 (100%)
2 2219 bp 38.76 4.26 96.67
bjp_ig2158_scaffold_14744
Species: Dethiobacter alkaliphilus (100%)
2 2435 bp 42.09 4.68 75.77
bjp_ig2158_scaffold_20818
Species: Thermaerobacter marianensis (50%)
2 1792 bp 38.56 5.69 39.68
bjp_ig2158_scaffold_20565
Species: Dethiobacter alkaliphilus (100%)
2 1811 bp 35.56 5.30 81.67
bjp_ig2158_scaffold_14749
Species: Desulfotomaculum acetoxidans (50%)
2 2434 bp 34.31 6.53 82.95
bjp_ig2158_scaffold_26718
Species: Dethiobacter alkaliphilus (50%)
2 1422 bp 44.09 6.01 98.31
bjp_ig2158_scaffold_17408
Species: Dethiobacter alkaliphilus (50%)
2 2104 bp 31.27 5.63 60.60
bjp_ig2158_scaffold_21555
Species: CG_Desulfob_01 (50%)
2 1736 bp 33.99 9.85 86.75
bjp_ig2158_scaffold_26725
Species: Eubacterium sp. CAG:115 (50%)
2 1422 bp 31.86 3.69 99.16
bjp_ig2158_scaffold_19054
Species: CG_CP01_01 (100%)
2 1939 bp 40.90 6.81 82.77
bjp_ig2158_scaffold_13222
Species: Dethiobacter alkaliphilus (100%)
2 2676 bp 43.72 5.72 81.39
bjp_ig2158_scaffold_13225
Species: Bacillus selenatarsenatis (50%)
2 2676 bp 34.79 7.57 100.90
bjp_ig2158_scaffold_18710
Species: Syntrophothermus lipocalidus (50%)
2 1974 bp 31.61 7.75 83.13
bjp_ig2158_scaffold_19062
Species: Dethiobacter alkaliphilus (50%)
2 1938 bp 41.90 4.80 83.90
Displaying items 301-350 of 441 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.