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bjp_ig2158_scaffold_5989_5

Organism: BJP_Ig2158_Hor_250_2014_Bacteroidetes_37_5_partial

partial RP 36 / 55 MC: 4 BSCG 34 / 51 MC: 2 ASCG 5 / 38
Location: comp(3464..4042)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KL93_SOLCM similarity UNIREF
DB: UNIREF100
  • Identity: 38.6
  • Coverage: 189.0
  • Bit_score: 139
  • Evalue 4.40e-30
RNA polymerase sigma factor {ECO:0000313|EMBL:KEQ29765.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter a similarity UNIPROT
DB: UniProtKB
  • Identity: 40.2
  • Coverage: 189.0
  • Bit_score: 140
  • Evalue 2.80e-30
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 38.6
  • Coverage: 189.0
  • Bit_score: 139
  • Evalue 1.20e-30

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Taxonomy

Pedobacter antarcticus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 579
ATGACAGAAGCACCAACGGATAGCTTATCCGATGAAGTACTTGTTCATTTAGTTAAAGAGAACCATCCCGGTGCATTTGAGTCACTGGTAAATCGACATAAAAGGATGGTTTTTAATTTAGCCTACCGCCTACTTGGCAACTACCATGTTGCCGAGGAGGCGGCTCAGGATTCTTTTGTAAAAGCCTTCCATTCAATTAATTCATTTAGAAACGAAAGTGGATTCGCAACATGGTTATACCGAATTTGTTATAACACTTGCATCACTCAAAAGAGAAAGAAAAACCTTGAAATAAAGGAGATAAACGAGAGTATTTTAGGAGGGGTTAATGCCCAACATACTCCTGTCTTTTTAGAGCAATCTGATAGATTAACCTATCTTAGTAAAGCCCTGAATGCATTAGATCCAGAGGATGCAACAATAGTAAATCTTTTTTATATTGATGATACTCCTACTAGCGAGATCGCTAGTATTATTGGGATTTCTGAGGGTAACGTTCGAATAAAACTACATAGAGCAAGGAAGAAACTTAAGGAGGAACTTTTCGGAATTCTTAAGGATGAAGCTGTTAATCTTTAA
PROTEIN sequence
Length: 193
MTEAPTDSLSDEVLVHLVKENHPGAFESLVNRHKRMVFNLAYRLLGNYHVAEEAAQDSFVKAFHSINSFRNESGFATWLYRICYNTCITQKRKKNLEIKEINESILGGVNAQHTPVFLEQSDRLTYLSKALNALDPEDATIVNLFYIDDTPTSEIASIIGISEGNVRIKLHRARKKLKEELFGILKDEAVNL*