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BJP_Ig2158_Hor_250_2014_Bacteroidetes_37_5_partial

BJP_IG2158_Bacteroidetes_38_5
In projects: 09V250M02_2014  |  horonobe_genomes

Consensus taxonomy: Bacteroidetes  →  Bacteria

Metagenomic Context

Parent: BJP_IG2158_UNK

Properties

Avg. coverage: 5.31 Longest contig: 16.00 Kbp Bin length: 2.08 Mbp GC content: 37.69 %
Contigs count: 541 Features count: 2301 rRNAs count: 0 tRNAs count: 23

Genome completeness

partial RP 36 / 55 MC: 4 BSCG 34 / 51 MC: 2 ASCG 5 / 38

Description

Approx

Displaying items 201-250 of 541 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
bjp_ig2158_scaffold_17060
Class: Bacteroidia (75%)
4 2144 bp 38.62 4.41 96.97
bjp_ig2158_scaffold_17574
Phylum: Bacteroidetes (50%)
4 2088 bp 40.90 5.03 94.40
bjp_ig2158_scaffold_11413
Class: Bacteroidia (50%)
4 3043 bp 35.13 4.83 81.93
bjp_ig2158_scaffold_9087
Species: Flavobacteriales bacterium BRH_c54 (50%)
4 3714 bp 35.35 6.02 85.35
bjp_ig2158_scaffold_8936
Class: Bacteroidia (50%)
4 3775 bp 36.00 5.48 94.41
bjp_ig2158_scaffold_9610
Species: GWA2_Bacteroidetes_31_9b_curated (50%)
4 3534 bp 36.56 5.35 88.37
bjp_ig2158_scaffold_13915
Order: Bacteroidales (50%)
4 2557 bp 37.15 4.69 84.83
bjp_ig2158_scaffold_8692
Class: Bacteroidia (50%)
4 3872 bp 39.77 4.30 91.58
bjp_ig2158_scaffold_10157
Species: RIFOXYD2_FULL_Elusimicrobia_34_15_curated (50%)
4 3372 bp 38.61 5.07 85.32
bjp_ig2158_scaffold_5246
Species: GWE2_Bacteroidetes_32_14_curated (50%)
4 5999 bp 35.27 5.03 89.77
bjp_ig2158_scaffold_9364
Class: Bacteroidia (50%)
4 3623 bp 43.17 4.89 92.58
bjp_ig2158_scaffold_9620
Phylum: Bacteroidetes (50%)
4 3530 bp 38.58 5.14 81.50
bjp_ig2158_scaffold_11186
Phylum: Bacteroidetes (100%)
4 3103 bp 38.12 4.35 90.30
bjp_ig2158_scaffold_19764
Species: BJP_08E140C01_Bacteriodales_41_10 (50%)
4 1875 bp 38.51 3.84 83.84
bjp_ig2158_scaffold_9118
Species: BJP_08E140C01_Flavobacteriales_35_8 (50%)
4 3703 bp 35.65 6.56 81.74
bjp_ig2158_scaffold_15841
Class: Bacteroidia (75%)
4 2284 bp 37.61 4.73 90.19
bjp_ig2158_scaffold_8972
Class: Bacteroidia (50%)
4 3760 bp 29.12 3.55 88.24
bjp_ig2158_scaffold_10437
Species: RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated (50%)
4 3294 bp 35.31 4.92 85.61
bjp_ig2158_scaffold_13175
Class: Bacteroidia (50%)
4 2683 bp 37.42 4.92 98.17
bjp_ig2158_scaffold_10184
Class: Bacteroidia (75%)
4 3363 bp 39.07 4.15 94.02
bjp_ig2158_scaffold_6792
Species: RBG_19FT_COMBO_Chloroflexi_50_10_curated (75%)
4 4792 bp 42.11 4.91 86.83
bjp_ig2158_scaffold_13177
Class: Bacteroidia (50%)
4 2683 bp 38.09 4.92 89.79
bjp_ig2158_scaffold_14202
Phylum: Bacteroidetes (50%)
4 2510 bp 38.05 4.36 87.37
bjp_ig2158_scaffold_17115
Class: Bacteroidia (75%)
4 2137 bp 41.09 3.93 97.15
bjp_ig2158_scaffold_5533
Species: BJP_IG2103_Bacteroidetes_41_9 (75%)
4 5708 bp 39.35 5.47 96.60
bjp_ig2158_scaffold_14462
Species: GWD2_Bacteroidetes_33_33_curated (50%)
4 2474 bp 38.60 5.15 92.64
bjp_ig2158_scaffold_24928
Phylum: Bacteroidetes (50%)
4 1519 bp 29.10 3.65 90.45
bjp_ig2158_scaffold_8217
Species: BJP_08E140C01_Flavobacteriales_35_8 (50%)
4 4059 bp 35.38 4.47 81.15
bjp_ig2158_scaffold_9139
Class: Bacteroidia (50%)
4 3696 bp 41.77 4.67 93.59
bjp_ig2158_scaffold_11985
Class: Bacteroidia (50%)
4 2923 bp 38.25 4.57 79.95
bjp_ig2158_scaffold_10720
Class: Bacteroidia (50%)
4 3216 bp 41.42 3.78 96.92
bjp_ig2158_scaffold_10723
Phylum: Bacteroidetes (75%)
4 3215 bp 37.08 4.81 90.33
bjp_ig2158_scaffold_9668
Class: Bacteroidia (50%)
4 3515 bp 39.12 4.78 78.01
bjp_ig2158_scaffold_12500
Order: Bacteroidales (50%)
4 2813 bp 37.40 4.91 91.72
bjp_ig2158_scaffold_11485
Order: Bacteroidales (50%)
4 3026 bp 38.10 4.81 80.80
bjp_ig2158_scaffold_22327
Class: Bacteroidia (50%)
4 1681 bp 37.42 4.37 74.42
bjp_ig2158_scaffold_8751
Domain: Bacteria (50%)
4 3850 bp 35.43 4.29 80.49
bjp_ig2158_scaffold_9416
Species: RLO_Flavobacteria_35_11 (50%)
4 3605 bp 35.53 6.57 60.33
bjp_ig2158_scaffold_6059
Class: Bacteroidia (100%)
4 5272 bp 35.03 4.81 92.64
bjp_ig2158_scaffold_6319
Species: Flavobacteriales bacterium BRH_c54 (75%)
4 5095 bp 35.05 7.12 96.04
bjp_ig2158_scaffold_15120
Phylum: Bacteroidetes (75%)
4 2379 bp 36.74 4.22 98.99
bjp_ig2158_scaffold_15888
Phylum: Bacteroidetes (100%)
4 2279 bp 38.04 5.40 91.88
bjp_ig2158_scaffold_7269
Class: Bacteroidia (75%)
4 4509 bp 36.70 5.06 92.55
bjp_ig2158_scaffold_15126
Class: Bacteroidia (75%)
4 2378 bp 33.77 4.23 83.01
bjp_ig2158_scaffold_10490
Species: RLO_Flavobacteria_35_11 (50%)
4 3283 bp 35.00 6.35 86.08
bjp_ig2158_scaffold_8770
Species: GWE2_Bacteroidetes_40_63_curated (50%)
4 3843 bp 39.66 4.45 94.85
bjp_ig2158_scaffold_6849
Species: Flavobacteriales bacterium BRH_c54 (50%)
4 4755 bp 39.35 4.57 94.32
bjp_ig2158_scaffold_2707
Domain: Bacteria (75%)
4 10290 bp 38.48 5.16 93.73
bjp_ig2158_scaffold_13493
Class: Bacteroidia (50%)
4 2627 bp 38.98 6.97 98.10
bjp_ig2158_scaffold_5591
Species: BJP_08E140C01_Flavobacteriales_35_8 (50%)
4 5644 bp 35.97 6.27 91.48
Displaying items 201-250 of 541 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.