ggKbase home page

bjp_ig2158_scaffold_5617_4

Organism: BJP_Ig2158_Hor_250_2014_Atribacteria_34_32

partial RP 16 / 55 MC: 2 BSCG 18 / 51 ASCG 5 / 38 MC: 1
Location: 886..1404

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00036CEF81 similarity UNIREF
DB: UNIREF100
  • Identity: 97.0
  • Coverage: 168.0
  • Bit_score: 315
  • Evalue 3.10e-83
  • rbh
16S rRNA processing protein rimm; K02860 16S rRNA processing protein RimM Tax=RBG_19FT_COMBO_JS1_35_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 84.5
  • Coverage: 168.0
  • Bit_score: 276
  • Evalue 2.90e-71
Ribosome maturation factor rimM similarity KEGG
DB: KEGG
  • Identity: 44.6
  • Coverage: 166.0
  • Bit_score: 158
  • Evalue 2.30e-36

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_19FT_COMBO_JS1_35_14_curated → Atribacteria → Bacteria

Sequences

DNA sequence
Length: 519
TTGAGTCGAGAATTTATTATAATTGGTAAAGTGGTTTCTACCCAGGGCAATAAAGGGGAAGTTAATGTTTTGCCCCTTACCGATTCAATTGACAGATTTAAAAATTTAGATAACGTTTTTTTAAGAAGTAAAAAAAGCCAAACAATATTAAATGTAGAGAAAATAAGAAAAAGAAAAGATACGGTTATTTTAAAATTGAAGGATATAGAAAATATTGAAGAAGCCAAGATGATAGTAGGCTCTTTTCTTGAGGTTGAAAGAAAAAATGCTGTAAAGCTGCCAAAAGAAACTTATTTTATATTTGAAATAATTGGCCTTGAAGTATATGACGAGAATAATATTTTTCTGGGAAAAGTAGAAAATGTTATAAGCACAGGTAGCAATGATGTGTATGTAGTTAAAAGTAAAGATAAAGAGGAATTATTTATCCCGGCTATTCGTGAAGTTGTAAAAAATGTTAGTTTAGAAAAAAAGCGAATTACCATAAAGATGGTAGATGGATTAAATGGATTAATATGA
PROTEIN sequence
Length: 173
LSREFIIIGKVVSTQGNKGEVNVLPLTDSIDRFKNLDNVFLRSKKSQTILNVEKIRKRKDTVILKLKDIENIEEAKMIVGSFLEVERKNAVKLPKETYFIFEIIGLEVYDENNIFLGKVENVISTGSNDVYVVKSKDKEELFIPAIREVVKNVSLEKKRITIKMVDGLNGLI*