ggKbase home page

Ig8144_scaffold_1790_25

Organism: 09V250M02_Ig8144_Hor_250_2016_Methanomicrobiales_46_132

near complete RP 37 / 55 MC: 9 BSCG 25 / 51 ASCG 38 / 38
Location: comp(27184..28155)

Top 3 Functional Annotations

Value Algorithm Source
Replication factor C small subunit Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=RFCS_METHJ similarity UNIREF
DB: UNIREF100
  • Identity: 87.0
  • Coverage: 323.0
  • Bit_score: 563
  • Evalue 7.10e-158
rfc; replication factor C small subunit similarity KEGG
DB: KEGG
  • Identity: 87.0
  • Coverage: 323.0
  • Bit_score: 563
  • Evalue 2.00e-158
Replication factor C small subunit {ECO:0000255|HAMAP-Rule:MF_01509}; Short=RFC small subunit {ECO:0000255|HAMAP-Rule:MF_01509};; Clamp loader small subunit {ECO:0000255|HAMAP-Rule:MF_01509}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanospirillaceae; Methanospirillum.;" source="Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC; 100397 / JF-1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.0
  • Coverage: 323.0
  • Bit_score: 563
  • Evalue 1.00e-157

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Methanospirillum hungatei → Methanospirillum → Methanomicrobiales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 972
ATGGATGATGCACACGCCATCTGGATAGAGAAATACCGACCCAAAGTTCTGGCTGATATAATCGGTCAGCAGGAGATTATCGAACGTCTCCGCTCGTATGTAGGGAAACGTGAAATGCCACACCTTCTGTTTACCGGCAGTGCCGGAACGGGAAAGACCACGGCAGCAGTAGCTCTTGCCAGGGAATTTTTTGGAGAGGACTGGCAGATGAACTTTCGGGAGCTGAACGCCTCTGATGAGCGTGGAATTGATGTTGTGCGTAACCAGATCAAACAGTTTGCACGGACATCACCGTTTGGCGGATCTACGTTTAAGATACTGTTCCTCGATGAGGCAGATGCCCTGACTACTGATGCGCAGTCTGCATTACGGCGAACGATGGAGACCTATGCACAGACCTGCCGGTTTATTCTCTCCTGTAACTATTCAGCAAAAATTATCGATCCAATCCAGAGCAGATGTGCAATATACCGGTTCCTTCCCTTAAACCGTCAGGCAATTGCTGAGATGATCCTTCGTATCGGATCTGACCAGGGCCTTACGATCCGTGAAGAAGTTATTGACGCTATCGTTTATGTATCACAGGGTGATATGCGAAAAGCAATAAATGCACTCCAGGGGGCGGCTATCCTTGGTCGTGAGATAAGCCCGGATATGATATTTGCTATCACTGCTACTGCCCGTCCTGAAGAGATAGAAGATCTCATAGAACTCTGTCTTGCCGGGAACTTTGTAGGAGCAGGTGGTGCATTAAAGGCTCTCCTCCATGACCGGGGAATTGCTCCCCAGGAACTTATCGGGCAGCTCTACCGGGCAATCATCAAATGGGATATACCAGAAGGAGTTAAGGTAAAACTCATCGATAACCTTGGGGAGACGGATTTCAGGCTGTCTGAAGGGGCAGGCAGTGATATTCAGATGCAGGCACTGATCGCAAAGTTTGTGATGTGTGGTGGTAAAACAGCAAAATAG
PROTEIN sequence
Length: 324
MDDAHAIWIEKYRPKVLADIIGQQEIIERLRSYVGKREMPHLLFTGSAGTGKTTAAVALAREFFGEDWQMNFRELNASDERGIDVVRNQIKQFARTSPFGGSTFKILFLDEADALTTDAQSALRRTMETYAQTCRFILSCNYSAKIIDPIQSRCAIYRFLPLNRQAIAEMILRIGSDQGLTIREEVIDAIVYVSQGDMRKAINALQGAAILGREISPDMIFAITATARPEEIEDLIELCLAGNFVGAGGALKALLHDRGIAPQELIGQLYRAIIKWDIPEGVKVKLIDNLGETDFRLSEGAGSDIQMQALIAKFVMCGGKTAK*