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13_1_20cm_full_scaffold_727_6

Organism: 13_1_20CM_Gemmatimonadetes_69_28

partial RP 8 / 55 BSCG 9 / 51 ASCG 4 / 38
Location: comp(5525..6865)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-54 dependent DNA-binding response regulator n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MP50_CORCM similarity UNIREF
DB: UNIREF100
  • Identity: 48.6
  • Coverage: 393.0
  • Bit_score: 324
  • Evalue 1.30e-85
atoC6; sigma-54 dependent DNA-binding response regulator Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 55.6
  • Coverage: 439.0
  • Bit_score: 453
  • Evalue 3.40e-124
sigma-54 factor interaction domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 56.5
  • Coverage: 434.0
  • Bit_score: 427
  • Evalue 4.10e-117

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1341
GTGACGGCGGCCGGTGACGTAGCGCTGCTCGTCGTCCGGCTGAGCGATTCGTTCGGCGACTTCTGGCCCGCCCTCGCCCGCGAGCTCGACGTGCCGCTCACGGAGTGGACCCCGGGGCCGGACGCGCCGCCGCCGCCCCGCGCCGGGGTCGTGCTCGTTGCGGCGGGGGGACACGAGACGGAAGTCGGCAGCGTCCTGCTGCTGCTCGGCATGCCCGCGGACATCCCGGTAGTGGCCGTCGGAGCGTCCACGTCGCATCGCGTGGCCGCGCAGGCGGTGGCGGCCGGCGCGTCCGACTATTTCGCCCTCCCCGACGACCGCGACGGGCTGCGCGACGCACTCGCCGTCGCCGTGCAACGCCGCCGTGCCGCCATCGGGCGCGCCGCCCTGTCACTCCTGGAAGCCCAAGCGCACGCCTTCCGCGAGATCGTGGGGGAAAGCCCCGCGTTGCGTGCCGTACTCGAGCGCGCCGCGCGCGTCGTGCCCCACGCGGAGGCGACCGTCCTGCTCACGGGCGAGACAGGCACTGGGAAGGAGCTGCTCGCTCGGGCACTCCACTATGGCGGGCCGCGCGCCGCGGCGCCGTTCGTAGAGCTGAACTGTGCCGCTCTCCCGGCGCCCCTGCTCGAGAGCGAGCTGTTCGGCCACGAGCGCGGCGCGTTCACCGACGCCAGGACCGCCAAGCCCGGCCTGTTCGAAGTCGCCGAAGGCGGCACGCTGTTCCTCGACGAGATCGACCGCCTCGCCCCAGAGCTGCAGGGGAAGCTGTTGCGCGCCCTCGAGCAAAAAACCATGCGTCGCCTCGGTGCGACGGTGAGCCACACCGTCGACGTGCGCATCGTCGCCGCGACGAATACCGATCTCGCGGCCGCCGTGCAGCACGGACTGTTCCGGGAGGACTTGTACTACCGGCTCAACGTCGTGACGCTGGAGCTGCCGCCGTTGCGGGCGCGCGGACAGGACGTCGTCCTGCTCGCCGAGTTCTTTCTGAGCAGATTCAGCGCTCGCTACGGGCTGCCCGAACCGCCGCTCACGCCTGAGGCACGCCGCACCCTGCTCGCACACTCCTGGCCCGGAAACATCCGGGAGCTCCGCAACACGATCGAGCGCACCATCCTGCTGTCCCCGGCCGGTACCTTCGCCGTCGCCGAGCTCGAGCCGGCCCGCGTGACCACTGCCGCTGCCCCCGTCCCCTTCCCCGCTACGCTGGCGGAAATCCAGAAGGCCGCCGCGCGCGCGATGCTCGCCGCGACCGGCGGCAACCGGTCGGAGGCCGCCCGCCGGCTCGGCATATCCCGGTCCCGGCTGTTGCGCTTGTTGGAACGCGGTGACGCGAATTGA
PROTEIN sequence
Length: 447
VTAAGDVALLVVRLSDSFGDFWPALARELDVPLTEWTPGPDAPPPPRAGVVLVAAGGHETEVGSVLLLLGMPADIPVVAVGASTSHRVAAQAVAAGASDYFALPDDRDGLRDALAVAVQRRRAAIGRAALSLLEAQAHAFREIVGESPALRAVLERAARVVPHAEATVLLTGETGTGKELLARALHYGGPRAAAPFVELNCAALPAPLLESELFGHERGAFTDARTAKPGLFEVAEGGTLFLDEIDRLAPELQGKLLRALEQKTMRRLGATVSHTVDVRIVAATNTDLAAAVQHGLFREDLYYRLNVVTLELPPLRARGQDVVLLAEFFLSRFSARYGLPEPPLTPEARRTLLAHSWPGNIRELRNTIERTILLSPAGTFAVAELEPARVTTAAAPVPFPATLAEIQKAAARAMLAATGGNRSEAARRLGISRSRLLRLLERGDAN*