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13_1_20cm_full_scaffold_1765_8

Organism: 13_1_20CM_Verrucomicrobia_54_28

partial RP 40 / 55 BSCG 37 / 51 ASCG 8 / 38
Location: comp(4353..5567)

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XQD3_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 69.7
  • Coverage: 402.0
  • Bit_score: 561
  • Evalue 5.70e-157
Putative RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EEF57957.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivisi similarity UNIPROT
DB: UniProtKB
  • Identity: 69.7
  • Coverage: 402.0
  • Bit_score: 561
  • Evalue 8.10e-157
sigma factor, ECF subfamily protein similarity KEGG
DB: KEGG
  • Identity: 55.5
  • Coverage: 398.0
  • Bit_score: 425
  • Evalue 1.80e-116

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1215
ATGGTTGCCATTCTCACCCGAATCTTTGGCATCGAGCATCTCAACCTTGCGGAAGACGTTGTTCAGGAGGCGCTCGCGCGGGCGTTGCAAACCTGGCCGTTCTATGGAGTTCCGAAAAATCCGTCAGCATGGATTATGCGTGCGTCGCGCAATCTCGCGCTGGACGTCGTTCGCCGACGAAAAGTATTTCAGAACAAACAAGCGGAAATCAGTCGTCTAATGGATCGCGACAGCGCCACGTCGGACGAAGCGATTTTTTCAGAAGACGAAATTAGCGATGACCGTTTGCGCTTGATGTTCGTCTGTTGTCACCCAGCCATTCCAGCGGAGGCGCAGGTCGCCCTCGCGTTGAAGACGCTGTGCGGCTTTAGTGTCGCGGAAATAGGGCACGCATTTCTAACCACAGAGGCTGCAATTGCCAAGCGACTGACCAGGGCGAAACAAAAAATCCATCAGACGCGAATCCCGTTTGAAATTCCCGCAGGCGGAGAATTGGGGCAGCGCTTGGATAGTGTTTTGCAATCGCTTTACCTCCTGTTTAACGAAGGCTACAAAGCGTCGAGCGGTGACAATCTCGTTCGCGAGGAGCTCTGCGAAGAAGCAATTCGCCTTGCCGAGTTATTGGTGGCTCATCCAGCCGGCAATCAGCCAGAGACGCACGCGTTGCTGGCGTTGATGTTGTTGAACGCCGCTCGCAATCCGACGCGGCTCGACACCGGGGGTAATCTGCTGCGCCTGCAAGAGCAGGACCGGACGCGTTGGGACAAATCAATGATCGCGCGCGGCATGTTTCACTTCGCGCAGTCGGCAGCAGGCAACGAGCTCAGCGAGTATCATCTTCAGTCGGGAATTGCGGCATGTCACTGCGCTGCGAAGGACTACGAGTCCACCAACTGGCATCAGATCCTTTCGCTTTACGACCGGTTGATCGAATTCGATCAGTCGCCGGTCGTAGCCCTCAATCGTGCAGTGGCGATCGCCAACATCCGCGGAGCAAAAGCCGGACTCCAGGCTGTACGGCGAATTCGAAATCTCAATAAACTGAGTTCATATTACCTGCTTTATGCAGTGCTCGGTGAATTCGAAATGCAGTCGGGAAATCCGCAAGCCGCTGCCGAACAATTCCGCAAATCATTTGAACTAGCAGAGACCAAATCGGAGCGAGCGTTTCTTTTGAAAAGACTGCAGCGCTGCGTTGACGGAGAGACGACCTAG
PROTEIN sequence
Length: 405
MVAILTRIFGIEHLNLAEDVVQEALARALQTWPFYGVPKNPSAWIMRASRNLALDVVRRRKVFQNKQAEISRLMDRDSATSDEAIFSEDEISDDRLRLMFVCCHPAIPAEAQVALALKTLCGFSVAEIGHAFLTTEAAIAKRLTRAKQKIHQTRIPFEIPAGGELGQRLDSVLQSLYLLFNEGYKASSGDNLVREELCEEAIRLAELLVAHPAGNQPETHALLALMLLNAARNPTRLDTGGNLLRLQEQDRTRWDKSMIARGMFHFAQSAAGNELSEYHLQSGIAACHCAAKDYESTNWHQILSLYDRLIEFDQSPVVALNRAVAIANIRGAKAGLQAVRRIRNLNKLSSYYLLYAVLGEFEMQSGNPQAAAEQFRKSFELAETKSERAFLLKRLQRCVDGETT*