ggKbase home page

13_1_20cm_full_scaffold_2307_6

Organism: 13_1_20CM_Verrucomicrobia_54_28

partial RP 40 / 55 BSCG 37 / 51 ASCG 8 / 38
Location: comp(4012..5259)

Top 3 Functional Annotations

Value Algorithm Source
Histidine--tRNA ligase {ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|SAAS:SAAS00043629};; TaxID=481448 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales similarity UNIPROT
DB: UniProtKB
  • Identity: 55.3
  • Coverage: 398.0
  • Bit_score: 434
  • Evalue 2.00e-118
Histidyl-tRNA synthetase n=1 Tax=Methylacidiphilum infernorum (isolate V4) RepID=B3DX00_METI4 similarity UNIREF
DB: UNIREF100
  • Identity: 55.3
  • Coverage: 398.0
  • Bit_score: 434
  • Evalue 1.40e-118
hisS; Histidyl-tRNA synthetase similarity KEGG
DB: KEGG
  • Identity: 55.3
  • Coverage: 398.0
  • Bit_score: 434
  • Evalue 4.00e-119

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Methylacidiphilum infernorum → Methylacidiphilum → Methylacidiphilales → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1248
ATGTTTATGCAGGCTTTACCCGGTTTCCGTGATTTCCTTCCCGACGATTGCGCAGCGCGGAATTACGTTTTTGCCCGCTGGCGCGAAGTCGCGCGGCGCTGCGCTTTTGTCGAATGGGACGGTCCCCCGCTCGAGGCAACCGAGTTATACAGAAAGAAGAGCGGGGCGGAAATTGTCGATCAACTTTTCAATTTCACTGACAAGGGCGAACGCGAAGTGGCGATGCGCCCGGAGCTAACGCCCACGCTTGCACGCGTAGTCGCCGTGCATGAGCGCGAATTTAAGAAACCGCTCAAATGGTTTTCTATCGGTCAATTTTTCCGTTACGAAAAACAACAGCGCGGAAGATTACGCGAACATTTTCAGCTCAACTGCGACATTATCGGAGAAGCAAACCTTGCCGCTGATATCGAGCTCATGGCGCTTTGCATCGATATCCTGCGCGCCTTCGGGTTCACCGACAAGGATTTTGTGGTACGAGTCAGCGACCGCGATTTCTGGACCGATTTTCTCCGAGAAAAAGATATCTCTGCGGACCGATGGGACGAATTATTACAGGCAATCGATAAATTCGGGCGCGAGCCGCGCGAGAAAACAGCCGAGAAACTTGGCAATCTCGCCGACCCGGTCTTTGCGATTCTAAAAAGCGGCGGAAAAAGTGAGAAGCTCGATAAACTTGTCGATGGCCTTCGTGCGCGAGGATTGGCGGACTTCGTCTCCATTGATGTCGGTATCGTGCGCGGGTTGGCCTATTACACGGGCATCGTATTCGAAGTGTTCGACCGCGCAGGGAAATTTCGCGCCATAGCTGGTGGCGGCCGTTATGACAACCTAATTGCGCAACTAAGTGATGGCGCTGTTTCGATGCCGGCACTCGGTTTTGCAATGGGGGACGTCGTGCTCGGCGAGTTAATCAATGAAACAGCTCATGTGCGTCAGAAATTGGAGAATGCAATCGCGAACAGTCGGAAGATCGACATTTACGTTGTTATCGCAAAGGAACAGTGCCGCGCTGATGCGCTTGGGCAAATTCAACAACTTCGCGACCGCGGCTATCGAGTGGATTATCCACTCACCAGCGAAAAGGTCGGCAAACAATTCCAAATCGCTGAGCAACTCGGAGCGCGCGTTGCGGTTTTGTTCGGAGATGAATGGCCGCAACTGAAACTAAAGGACATGAGCTCCGGCGAACAGCACCTCGTCTCAAAAGACGATTTTATGTCGGATGTGGAATCTACCCTGCGCTAG
PROTEIN sequence
Length: 416
MFMQALPGFRDFLPDDCAARNYVFARWREVARRCAFVEWDGPPLEATELYRKKSGAEIVDQLFNFTDKGEREVAMRPELTPTLARVVAVHEREFKKPLKWFSIGQFFRYEKQQRGRLREHFQLNCDIIGEANLAADIELMALCIDILRAFGFTDKDFVVRVSDRDFWTDFLREKDISADRWDELLQAIDKFGREPREKTAEKLGNLADPVFAILKSGGKSEKLDKLVDGLRARGLADFVSIDVGIVRGLAYYTGIVFEVFDRAGKFRAIAGGGRYDNLIAQLSDGAVSMPALGFAMGDVVLGELINETAHVRQKLENAIANSRKIDIYVVIAKEQCRADALGQIQQLRDRGYRVDYPLTSEKVGKQFQIAEQLGARVAVLFGDEWPQLKLKDMSSGEQHLVSKDDFMSDVESTLR*