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13_1_20cm_full_scaffold_276_6

Organism: 13_1_20CM_Verrucomicrobia_54_28

partial RP 40 / 55 BSCG 37 / 51 ASCG 8 / 38
Location: 10192..10977

Top 3 Functional Annotations

Value Algorithm Source
probable thiamine biosynthesis lipoprotein apbe precursor transmembrane n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745D98 similarity UNIREF
DB: UNIREF100
  • Identity: 44.3
  • Coverage: 246.0
  • Bit_score: 191
  • Evalue 1.00e-45
apbe-like lipoprotein; K03734 thiamine biosynthesis lipoprotein Tax=RBG_16_Gamma2_60_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 46.7
  • Coverage: 246.0
  • Bit_score: 210
  • Evalue 2.30e-51
putative ApbE-like lipoprotein similarity KEGG
DB: KEGG
  • Identity: 44.6
  • Coverage: 242.0
  • Bit_score: 178
  • Evalue 2.50e-42

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Taxonomy

RBG_16_Gamma2_60_9_curated → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 786
ATGGAAAAAGTGCAGCGGCTGATGAGTTTTCACGATCCTACCAGCGATGTGGCCCGAATGAATTGCCACGCTTCGCGCCGCCCGGTCAAAGTTCATCCATGGACATGGCGCGTTTTGAAATCCGCACAGGAATTTTCACGTAAAAGCGATGGCGTTTTCGACATCACAATGGCCCGGCAACTCGTGAAATGGGATTATCTTCCGAGACCTGACACGCGGCTTTGTAGTGGCGGGAGCTGGCGCGACATCGTTCTCGACGATGAATACAACGTTCGATTCCGCCGCCGGCTGATCGTTGATCTGGGAGGCATTGCTAAGGGCTTTGCGGTTGATCGCGCTGTTGCAGCGTTGAAAAATAATTCTGTCACGGCCGGAATCGTAAACGCCGGCGGTGATCTGCGAACATTTGGATCGGCTTCGGAGGTTGTTTATGTGCGTCATCCCGCCGAGCCGACACGCATTGCCGGGGCGGTGCGCCTGCGCGAGCGTGCCATGGCGACCTCGGGAGTCTATTTCGAGCGTCGAAAATATCGCGGCAAGTATGTGGGCCCAATACTCGACGGACATACTGGTCAATCTGCCTGCGAACTAATCAGCGTGACCGTCGCGGCTGCCGAATGCATGATAGCGGACGCACTGACCAAACTTGTTTTTACGCTGCGTGGAAAAGCCGCGGGCTTGCTGGCGCAGTATCGTGCAGACGCGCTGTTGCTTGAGCGCAATGGTACGCCATCCTGGATGTTTCACTCGCCATGCGACACCCGCGACCAGACTCGATTCGATTGA
PROTEIN sequence
Length: 262
MEKVQRLMSFHDPTSDVARMNCHASRRPVKVHPWTWRVLKSAQEFSRKSDGVFDITMARQLVKWDYLPRPDTRLCSGGSWRDIVLDDEYNVRFRRRLIVDLGGIAKGFAVDRAVAALKNNSVTAGIVNAGGDLRTFGSASEVVYVRHPAEPTRIAGAVRLRERAMATSGVYFERRKYRGKYVGPILDGHTGQSACELISVTVAAAECMIADALTKLVFTLRGKAAGLLAQYRADALLLERNGTPSWMFHSPCDTRDQTRFD*