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13_1_20cm_full_scaffold_8_2

Organism: 13_1_20CM_Verrucomicrobia_54_28

partial RP 40 / 55 BSCG 37 / 51 ASCG 8 / 38
Location: comp(933..1862)

Top 3 Functional Annotations

Value Algorithm Source
Secretion protein HlyD family protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XI48_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 54.2
  • Coverage: 297.0
  • Bit_score: 288
  • Evalue 7.10e-75
Secretion protein HlyD family protein {ECO:0000313|EMBL:EEF60541.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.; similarity UNIPROT
DB: UniProtKB
  • Identity: 54.2
  • Coverage: 297.0
  • Bit_score: 288
  • Evalue 1.00e-74
RND family efflux pump membrane fusion protein similarity KEGG
DB: KEGG
  • Identity: 34.1
  • Coverage: 290.0
  • Bit_score: 149
  • Evalue 1.10e-33

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 930
ATGGAAAATCGATCTGCCCACTGTGTAGCGGGACGGGTTCGCCGTCGCGAACAACCCCGAAACAATCGCGACTCGCGAAGACTTTCGGAGTTGATGCACGCAGCGGGGGCTTTGACAATGATTCTGTTGCTCATCGGTTGCAGCGGTCGCGGGAAGGCGGTCTCGGGAACCATCGAAGTGGACGAGGCGCATGTGGGCCCGCGCGCGGGGGGCCGCGTCGAGAAAATTTTGGCGTGGGAAGGCGACCATTTGCACGAAGGCCAACTGATAGCGCAATTGGATGCGTCAGAGCTGCGAGCGCGTCGCGATCTTGCCGCCGCACAAATCGATACGGCGCTCCACGATGCGGACGCACAACAGGCGCAATTGGTGTTCTTGCAAGATGAAGCACGGCGTCAGCAGGATTTACTTCAGCGGAGAGTCGTTTCTTCGAGTGATGCTGAACGCGCGGGAAGCTCCGCGAAAACGCAGGAGAAGAACCTTGCCGCTGCGAAGATGCGTATCGCGCAGGCGCGTGCACAGCTTGCCGATATCGACGCGCAGCTAGCGGAAATGCAGGTCGTTGCTCCGGCCGATTCCGTCCTGGAGGTGCTCAGTGTGAAAGCGGGCGATGTGCTGCCGGCGAATCGCGAAGCCGCCACCCTGCTGCTGACCGGACACGTCTGGGTTCGCGTTTATGTTCCGGAATCCTGGCTGGGTTTGATCAAACTGGGCGAGCACGTCCGGGTCCGTGTCGATTCCTTTCCCGGCAAAGATTTCGACGGCGTCGTAGAGCAAATAAATCGTCAGGCCGAATTTACCCCGCGCAACGTGCAAACGGTCGCGGACCGTATCAAACAGGTGTTTGGGGTGAAGATTCGTTTGCCTCCCGACGACGATCGTTTGCGCGCCGGAATGGCTGCTGATGTTTATTTTCCCAATGTGAAATGA
PROTEIN sequence
Length: 310
MENRSAHCVAGRVRRREQPRNNRDSRRLSELMHAAGALTMILLLIGCSGRGKAVSGTIEVDEAHVGPRAGGRVEKILAWEGDHLHEGQLIAQLDASELRARRDLAAAQIDTALHDADAQQAQLVFLQDEARRQQDLLQRRVVSSSDAERAGSSAKTQEKNLAAAKMRIAQARAQLADIDAQLAEMQVVAPADSVLEVLSVKAGDVLPANREAATLLLTGHVWVRVYVPESWLGLIKLGEHVRVRVDSFPGKDFDGVVEQINRQAEFTPRNVQTVADRIKQVFGVKIRLPPDDDRLRAGMAADVYFPNVK*