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13_1_20cm_full_scaffold_237521_1

Organism: 13_1_20CM_Gemmatimonadetes_69_60_partial

partial RP 18 / 55 BSCG 18 / 51 ASCG 2 / 38
Location: 2..433

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEN0_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 75.5
  • Coverage: 143.0
  • Bit_score: 222
  • Evalue 2.20e-55
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_Gemmatimonadetes_66_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 90.2
  • Coverage: 143.0
  • Bit_score: 267
  • Evalue 8.60e-69
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 81.1
  • Coverage: 143.0
  • Bit_score: 242
  • Evalue 1.00e-61

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Taxonomy

RBG_16_Gemmatimonadetes_66_8_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 432
GTGCAGGAGGTGTTCATCCGGGTGTTCCGGCATCTGCACCGGTTCGACCAGACGAAGAAGTTCTCGACCTGGATCTACACGATCGCCTCGAACCTGGCGAAGAACGAGCTGCGGAACCGTTCCCGCAACCCGCTCGTGCTGTTCCAGACGATCAAGAAGCACTGGGAGGCAGACCACCGGCCGCTGCAGTTCGAGGACGCTACGGCGCGGCCCGACGATCTGTACCGCAAGCGCTACCTCAAGGAGGCGGTGGACCAGTGCGTCGACCAGCTCCCCACGCACCACCGGGCGGTGTTCGTGCTGCGCGAGCTCGAGGGGAAGAGCTACGCGGAGATCGCGGAGATCACGGGGTGTAACCTGGGGACCGTCAAGAGCCGTCTCAACCGGGCACGAAACAGCTTCGCCCAGCTGATCGAGCCACTGCTGGAATAG
PROTEIN sequence
Length: 144
VQEVFIRVFRHLHRFDQTKKFSTWIYTIASNLAKNELRNRSRNPLVLFQTIKKHWEADHRPLQFEDATARPDDLYRKRYLKEAVDQCVDQLPTHHRAVFVLRELEGKSYAEIAEITGCNLGTVKSRLNRARNSFAQLIEPLLE*